Evidence map›Paper›PMID 26774478›Full record

ArticleCell reports2016

Identifying Family-Member-Specific Targets of Mono-ARTDs by Using a Chemical Genetics Approach.

Ian Carter-O'Connell, Haihong Jin, Rory K Morgan, Roko Zaja, Larry L David, Ivan Ahel, Michael S Cohen

Abstract read
In one paragraph

Article in Cell reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 55 papers.

0numbers the graph read from it
0cells of the map it votes in
55citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

55 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Identification of porcine PARP11 as a restricted factor for pseudorabies virus.Frontiers in cellular and infection microbiology · 2024
    Article
  7. A ribose-functionalized NADChemical communications (Cambridge, England) · 2023
    Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Functionalised Cofactor Mimics for Interactome Discovery and Beyond.Angewandte Chemie (International ed. in English) · 2022
    Review
  13. Review
  14. Are PARPs promiscuous?Bioscience reports · 2022
    Review
  15. Intracellular mono-ADP-ribosyltransferases at the host-virus interphase.Cellular and molecular life sciences : CMLS · 2022
    Review
  16. Profiling of the ADP-Ribosylome in Living Cells.Angewandte Chemie (International ed. in English) · 2022
    Article
  17. Review
  18. Article
  19. Research Progress on Mono-ADP-Ribosyltransferases in Human Cell Biology.Frontiers in cell and developmental biology · 2022
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Ian Carter-O'ConnellProgram in Chemical Biology and Department of Physiology and Pharmacology, Oregon Health and Science University, Portland, OR 97210, USA.
Haihong JinProgram in Chemical Biology and Department of Physiology and Pharmacology, Oregon Health and Science University, Portland, OR 97210, USA.
Rory K MorganProgram in Chemical Biology and Department of Physiology and Pharmacology, Oregon Health and Science University, Portland, OR 97210, USA.
Roko ZajaSir William Dunn School of Pathology, University of Oxford, Oxford OX1 3RE, UK.
Larry L DavidDepartment of Biochemistry, Oregon Health and Science University, Portland, OR 97210, USA.
Ivan AhelSir William Dunn School of Pathology, University of Oxford, Oxford OX1 3RE, UK.
Michael S CohenProgram in Chemical Biology and Department of Physiology and Pharmacology, Oregon Health and Science University, Portland, OR 97210, USA. Electronic address: cohenmic@ohsu.edu.

Funding

Decoding protein MARylation networks in astrocytes using chemical biology approachesR01NS088629 · NINDS · OREGON HEALTH & SCIENCE UNIVERSITY · PI COHEN, MICHAEL S · 2014 to 2024
$4.2M
LTQ Orbitrap VelosS10OD012246 · OD · OREGON HEALTH & SCIENCE UNIVERSITY · PI DAVID, LARRY L · 2012 to 2012
$854k
EPA EP-C-15-008NIH HHS S10 OD012246NINDS NIH HHS 1R01NS088629NINDS NIH HHS R01 NS088629Wellcome Trust 101794
6 · The paper itself

Abstract

ADP-ribosyltransferases (ARTD1-16) have emerged as major downstream effectors of NAD(+) signaling in the cell. Most ARTDs (ARTD7 and 8, 10-12, and 14-17) catalyze the transfer of a single unit of ADP-ribose from NAD(+) to target proteins, a process known as mono-ADP-ribosylation (MARylation). Progress in understanding the cellular functions of MARylation has been limited by the inability to identify the direct targets for individual mono-ARTDs. Here, we engineered mono-ARTDs to use an NAD(+) analog that is orthogonal to wild-type ARTDs. We profiled the MARylomes of ARTD10 and ARTD11 in vitro, identifying isoform-specific targets and revealing a potential role for ARTD11 in nuclear pore complex biology. We found that ARTD11 targeting is dependent on both its regulatory and catalytic domains, which has important implications for how ARTDs recognize their targets. We anticipate that our chemical genetic strategy will be generalizable to all mono-ARTD family members based on the similarity of the mono-ARTD catalytic domains.

Indexed as

ADP Ribose TransferasesAmino Acid SequenceCatalytic DomainChromatography, High Pressure LiquidHEK293 CellsHeLa CellsHumansNADProtein Serine-Threonine KinasesTandem Mass SpectrometryADP Ribose TransferasesNADProtein Serine-Threonine KinasesSRPK2 protein, human

Identifiers

PMID26774478
PMCPMC5423403

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.