Evidence map›Paper›PMID 26772995›Full record

ArticleThe Plant cell2016

An Untranslated cis-Element Regulates the Accumulation of Multiple C4 Enzymes in Gynandropsis gynandra Mesophyll Cells.

Ben P Williams, Steven J Burgess, Ivan Reyna-Llorens, Jana Knerova, Sylvain Aubry, Susan Stanley, Julian M Hibberd

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
5.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 70 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Article
  5. Article
  6. Review
  7. Article
  8. A rapid method to quantify vein density in CPlant, cell & environment · 2023
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  10. CScience advances · 2023
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  11. Evolution of gene regulatory network of CPlant communications · 2023
    Article
  12. Distinct CPlant direct · 2021
    Article
  13. OBV (obscure vein), a CHorticulture research · 2021
    Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Review
  20. ZmOrphan94 Transcription Factor DownregulatesFrontiers in plant science · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Ben P WilliamsDepartment of Plant Sciences, University of Cambridge, Cambridge CB2 3EA, United Kingdom.ORCID http://orcid.org/0000-0002-2002-1410
Steven J BurgessDepartment of Plant Sciences, University of Cambridge, Cambridge CB2 3EA, United Kingdom.
Ivan Reyna-LlorensDepartment of Plant Sciences, University of Cambridge, Cambridge CB2 3EA, United Kingdom.
Jana KnerovaDepartment of Plant Sciences, University of Cambridge, Cambridge CB2 3EA, United Kingdom.
Sylvain AubryDepartment of Plant Sciences, University of Cambridge, Cambridge CB2 3EA, United Kingdom.ORCID http://orcid.org/0000-0002-7598-3609
Susan StanleyDepartment of Plant Sciences, University of Cambridge, Cambridge CB2 3EA, United Kingdom.
Julian M HibberdDepartment of Plant Sciences, University of Cambridge, Cambridge CB2 3EA, United Kingdom jmh65@cam.ac.uk.ORCID http://orcid.org/0000-0003-0662-7958
University of Cambridge · GB

Funding

Biotechnology and Biological Sciences Research Council BB/E012582/1Biotechnology and Biological Sciences Research Council BB/L014130/1
6 · The paper itself

Abstract

C4 photosynthesis is a complex phenotype that allows more efficient carbon capture than the ancestral C3 pathway. In leaves of C4 species, hundreds of transcripts increase in abundance compared with C3 relatives and become restricted to mesophyll (M) or bundle sheath (BS) cells. However, no mechanism has been reported that regulates the compartmentation of multiple enzymes in M or BS cells. We examined mechanisms regulating CARBONIC ANHYDRASE4 (CA4) in C4 Gynandropsis gynandra. Increased abundance is directed by both the promoter region and introns of the G. gynandra gene. A nine-nucleotide motif located in the 5' untranslated region (UTR) is required for preferential accumulation of GUS in M cells. This element is present and functional in three additional 5' UTRs and six 3' UTRs where it determines accumulation of two isoforms of CA and pyruvate,orthophosphate dikinase in M cells. Although the GgCA4 5' UTR is sufficient to direct GUS accumulation in M cells, transcripts encoding GUS are abundant in both M and BS. Mutating the GgCA4 5' UTR abolishes enrichment of protein in M cells without affecting transcript abundance. The work identifies a mechanism that directs cell-preferential accumulation of multiple enzymes required for C4 photosynthesis.

Indexed as

Carbonic AnhydrasesCleomeGenes, ReporterIntronsMesophyll CellsPhotosynthesisPlant LeavesPlant ProteinsPromoter Regions, GeneticSequence AlignmentUntranslated RegionsCarbonic AnhydrasesPlant ProteinsUntranslated Regions

Identifiers

PMID26772995
PMCPMC4790868
OpenAlexW2239138401

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.