Evidence map›Paper›PMID 26770724›Full record

ArticleSAGE open medicine2014

Gene promoter polymorphism of RUNX2 and risk of osteoporosis in postmenopausal Indonesian women.

Elza I Auerkari, Dwi A Suryandari, Sri S Umami, Lindawati S Kusdhany, Tut Wuri A Siregar, Tri Budi W Rahardjo, Christopher Talbot, Eef Hogervorst

Open access · goldAbstract read
In one paragraph

Article in SAGE open medicine, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed, 1 pooled it
–field-weighted citation impact, top 90% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 1 synthesis or guideline pooled it, 18 citations in OpenAlex.

  1. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Elza I AuerkariDepartment of Oral Biology, Faculty of Dentistry, University of Indonesia, Jakarta, Indonesia; Centre for Ageing Studies, University of Indonesia, Jakarta, Indonesia.
Dwi A SuryandariDepartment of Medical Biology, Faculty of Medicine, University of Indonesia, Jakarta, Indonesia.
Sri S UmamiDepartment of Medical Biology, Faculty of Medicine, University of Indonesia, Jakarta, Indonesia.
Lindawati S KusdhanyCentre for Ageing Studies, University of Indonesia, Jakarta, Indonesia; Department of Prosthodontics, Faculty of Dentistry, University of Indonesia, Jakarta, Indonesia.
Tut Wuri A SiregarDepartment of Oral Biology, Faculty of Dentistry, University of Indonesia, Jakarta, Indonesia.
Tri Budi W RahardjoCentre for Ageing Studies, University of Indonesia, Jakarta, Indonesia; Department of Prosthodontics, Faculty of Dentistry, University of Indonesia, Jakarta, Indonesia.
Christopher TalbotDepartment of Human Genetics, University of Leicester, Leicester, UK.
Eef HogervorstDepartment of Human Life Sciences, Loughborough University, Loughborough, UK.
University of Indonesia · IDLoughborough University · GBUniversity of Leicester · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectivesOsteoporosis is a metabolic bone disease of reduced bone mass density (BMD) and elevated risk of fracture due to an imbalance in bone formation and resorption. The risk and incidence of osteoporosis increase towards advanced age, particularly in postmenopausal women, and the risk is known to be affected by the variation in the expression of the associated regulatory genes. This work aimed to clarify the impact of variation in RUNX2 (runt domain transcription factor 2), which is an osteoblast-specific transcription factor that normally stimulates bone formation and osteoblast differentiation, regarding single-nucleotide polymorphism within RUNX2 promoter (P1) and risk of osteoporosis in postmenopausal Indonesian women.

methodsUsing DNA sampling from blood, the variation at the single-nucleotide polymorphism (-330, G→T, rs59983488) at the RUNX2 P1 promoter was investigated using polymerase chain reaction-restriction fragment length polymorphism for 180 consenting postmenopausal Indonesian women. The subjects were examined for bone mass density and classification to normal and those with osteopenia or osteoporosis by T-scoring with dual-energy X-ray absorptiometry. Chi-square testing and logistic regression were mainly used for statistical assessment.

resultsThe results showed a general trend with increased risk of osteoporosis associated with the genotype TT (mutant type) and the corresponding T allele of the tested polymorphism of RUNX2 promoter P1. The trend was, however, not significant in multivariate testing adjusted for age and time after menopause.

conclusionTo confirm the potential risk with TT genotype would require testing of a much larger sample of subjects. As the tested single-nucleotide polymorphism only represents one of the relevant candidate locations of RUNX2, the results are taken nevertheless to suggest an impact by overall RUNX2 variation in the risk of osteoporosis in Indonesian postmenopausal women.

Indexed as

MenopauseosteoporosispolymorphismRUNX2

Identifiers

PMID26770724
PMCPMC4607188
OpenAlexW2000598703

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.