Evidence map›Paper›PMID 26769193›Full record

ArticleActa neuropathologica communications2016

SF3B1 and EIF1AX mutations occur in primary leptomeningeal melanocytic neoplasms; yet another similarity to uveal melanomas.

Heidi V N Küsters-Vandevelde, David Creytens, Adriana C H van Engen-van Grunsven, Marcel Jeunink, Veronique Winnepenninckx, Patricia J T A Groenen, Benno Küsters, Pieter Wesseling, Willeke A M Blokx, Clemens F M Prinsen

Open access · goldAbstract read
In one paragraph

Article in Acta neuropathologica communications, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
6.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 45 citations in OpenAlex.

  1. Enhancement of the leptomeninges in a young man.Brain pathology (Zurich, Switzerland) · 2026
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  4. Co-occurrence ofAmerican journal of ophthalmology case reports · 2025
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  19. The genetics of uveal melanoma: current insights.The application of clinical genetics · 2016
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 3 countries.

Heidi V N Küsters-VandeveldeDepartment of Pathology, Canisius Wilhelmina Hospital, P.O. Box 9015, 6500, GS, Nijmegen, The Netherlands. h.kusters@cwz.nl.
David CreytensDepartment of Pathology, Ghent University Hospital, De Pintelaan 185, 9000, Ghent, Belgium.
Adriana C H van Engen-van GrunsvenDepartment of Pathology, Radboud University Medical Center, P.O. Box 9101, 6500, HB, Nijmegen, The Netherlands.
Marcel JeuninkDepartment of Pathology, Canisius Wilhelmina Hospital, P.O. Box 9015, 6500, GS, Nijmegen, The Netherlands.
Veronique WinnepenninckxDepartment of Pathology, Maastricht University Medical Center, P.O. Box 5800, 6202, AZ, Maastricht, The Netherlands.
Patricia J T A GroenenDepartment of Pathology, Radboud University Medical Center, P.O. Box 9101, 6500, HB, Nijmegen, The Netherlands.
Benno KüstersDepartment of Pathology, Radboud University Medical Center, P.O. Box 9101, 6500, HB, Nijmegen, The Netherlands.
Pieter WesselingDepartment of Pathology, Canisius Wilhelmina Hospital, P.O. Box 9015, 6500, GS, Nijmegen, The Netherlands.
Willeke A M BlokxDepartment of Pathology, Radboud University Medical Center, P.O. Box 9101, 6500, HB, Nijmegen, The Netherlands.
Clemens F M PrinsenDepartment of Pathology, Canisius Wilhelmina Hospital, P.O. Box 9015, 6500, GS, Nijmegen, The Netherlands.
Canisius-Wilhelmina Ziekenhuis · NLRadboud University Nijmegen · NLRadboud University Medical Center · NLGhent University Hospital · BEUniversity Medical Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionLike uveal melanomas, primary leptomeningeal melanocytic neoplasms (LMNs) frequently carry GNAQ and GNA11 mutations. However, it is currently unknown whether these LMNs harbor mutations in BAP1, SF3B1 and/or EIF1AX like uveal melanomas as well. In this study, we used Sanger sequencing for the detection of mutations in SF3B1 (hotspots in exon 14 and 15) and EIF1AX (exon 1 and 2 and flanking intronic regions) in a series of 24 primary LMNs. Additionally, BAP1 immunohistochemistry was used as a surrogate marker for the detection of inactivating mutations in the BAP1 gene.

resultsMutations in either SF3B1 or EIF1AX were identified in 8 out of 24 primary LMNs (33 %). The presence of these mutations was mutually exclusive and occurred in primary LMNs of different malignancy grades (melanocytomas, intermediate-grade melanocytic tumors, melanomas). Complete absence of nuclear BAP1 staining as is typically seen in BAP1-mutated tumors was not observed.

conclusionsOur finding that an SF3B1 or EIF1AX mutation is present in a substantial subset of primary LMNs underscores that these tumors genetically resemble uveal melanoma and are different from cutaneous melanoma at the genetic level. This information may not only aid in the differential diagnosis of primary versus metastatic melanocytic tumor in/around the central nervous system, but also in the identification of more promising therapeutic approaches targeting the molecular pathways involved in the oncogenesis of LMNs. As none of the primary LMNs in our series showed complete loss of nuclear BAP1 protein, it is unlikely that BAP1 mutations are frequent in these tumors but the role of this gene warrants further investigation.

Indexed as

AdultAgedDNA Mutational AnalysisEukaryotic Initiation Factor-1FemaleHumansMaleMelanocytesMelanomaMeningeal NeoplasmsMiddle AgedMutationPhosphoproteinsRibonucleoprotein, U2 Small NuclearRNA Splicing FactorsTumor Suppressor ProteinsBAP1 protein, humanEukaryotic Initiation Factor-1eukaryotic peptide initiation factor-1APhosphoproteinsRibonucleoprotein, U2 Small NuclearRNA Splicing FactorsSF3B1 protein, humanTumor Suppressor ProteinsUbiquitin Thiolesterase

Identifiers

PMID26769193
PMCPMC4714515
OpenAlexW2235635716

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.