Evidence map›Paper›PMID 26767784›Full record

ArticleRetrovirology2016

Identification and spontaneous immune targeting of an endogenous retrovirus K envelope protein in the Indian rhesus macaque model of human disease.

Helen L Wu, Enrique J Léon, Lyle T Wallace, Francesca A Nimiyongskul, Matthew B Buechler, Laura P Newman, Philip A Castrovinci, R Paul Johnson, Robert J Gifford, R Brad Jones and 1 more

Open access · goldAbstract read
In one paragraph

Article in Retrovirology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 7 institutions in 2 countries.

Helen L WuVaccine and Gene Therapy Institute, Oregon Health and Science University, Beaverton, OR, USA. wuhe@ohsu.edu.
Enrique J LéonVaccine and Gene Therapy Institute, Oregon Health and Science University, Beaverton, OR, USA. leonen@ohsu.edu.
Lyle T WallaceDepartment of Pathology and Laboratory Medicine, University of Wisconsin-Madison, Madison, WI, USA. wallacly@onid.oregonstate.edu.
Francesca A NimiyongskulDepartment of Pathology and Laboratory Medicine, University of Wisconsin-Madison, Madison, WI, USA. franimit@gmail.com.
Matthew B BuechlerDepartment of Pathology and Laboratory Medicine, University of Wisconsin-Madison, Madison, WI, USA. matthew.buechler@gmail.com.
Laura P NewmanDepartment of Pathology and Laboratory Medicine, University of Wisconsin-Madison, Madison, WI, USA. lauranewman@gmail.com.
Philip A CastrovinciDepartment of Pathology and Laboratory Medicine, University of Wisconsin-Madison, Madison, WI, USA. castrovinci@primate.wisc.edu.
R Paul JohnsonYerkes National Primate Research Center, Emory University, Atlanta, GA, USA. rpaul.johnson@emory.edu.
Robert J GiffordMRC-University of Glasgow Centre for Virus Research, Glasgow, UK. robert.gifford@glasgow.ac.uk.
R Brad JonesDepartment of Microbiology, Immunology and Tropical Medicine, George Washington University, Washington DC, USA. bradjones@email.gwu.edu.
Jonah B SachaVaccine and Gene Therapy Institute, Oregon Health and Science University, Beaverton, OR, USA. sacha@ohsu.edu.
University of Wisconsin–Madison · USChildren's Cancer Therapy Development Institute · USEmory University · USGeorge Washington University · USMRC University of Glasgow Centre for Virus Research · GBOregon Health & Science University · USOregon National Primate Research Center · US

Funding

Upgrade of confocal microscopy at the Oregon National Primate Research CenterP51OD011092 · OD · OREGON HEALTH & SCIENCE UNIVERSITY · PI Bonnie J. Nagel · 2012 to 2026
$203.9M
New England Primate Research Center Base GrantP51OD011103 · OD · HARVARD MEDICAL SCHOOL · PI FLIER, JEFFREY S · 2012 to 2013
$24.7M
Identifying endogenous retrovirus T cell targets in SIV-infected macaquesR21AI087474 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI SACHA, JONAH B. · 2010 to 2011
$439k
Medical Research Council MC_UU_12014/12NIAID NIH HHS R21 AI087474NIH HHS P51 OD011092NIH HHS P51 OD011103
6 · The paper itself

Abstract

backgroundEndogenous retroviruses (ERVs) are remnants of ancient retroviral infections that have invaded the germ line of both humans and non-human primates. Most ERVs are functionally crippled by deletions, mutations, and hypermethylation, leading to the view that they are inert genomic fossils. However, some ERVs can produce mRNA transcripts, functional viral proteins, and even non-infectious virus particles during certain developmental and pathological processes. While there have been reports of ERV-specific immunity associated with ERV activity in humans, adaptive immune responses to ERV-encoded gene products remain poorly defined and have not been investigated in the physiologically relevant non-human primate model of human disease.

findingsHere, we identified the rhesus macaque equivalent of the biologically active human ERV-K (HML-2), simian ERV-K (SERV-K1), which retains intact open reading frames for both Gag and Env on chromosome 12 in the macaque genome. From macaque cells we isolated a spliced mRNA product encoding SERV-K1 Env, which possesses all the structural features of a canonical, functional retroviral Envelope protein. Furthermore, we identified rare, but robust T cell responses as well as frequent antibody responses targeting SERV-K1 Env in rhesus macaques.

conclusionsThese data demonstrate that SERV-K1 retains biological activity sufficient to induce cellular and humoral immune responses in rhesus macaques. As ERV-K is the youngest and most active ERV family in the human genome, the identification and characterization of the simian orthologue in rhesus macaques provides a highly relevant animal model in which to study the role of ERV-K in developmental and disease states.

Indexed as

AnimalsAntibodies, ViralEndogenous RetrovirusesFemaleGene Products, envMacaca mulattaMaleMolecular Sequence DataSequence Analysis, DNAT-LymphocytesAntibodies, ViralGene Products, env

Identifiers

PMID26767784
PMCPMC4714462
OpenAlexW2235621770

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.