Evidence map›Paper›PMID 26766214›Full record

ArticlePloS one2016

Probing the Folding-Unfolding Transition of a Thermophilic Protein, MTH1880.

Heeyoun Kim, Sangyeol Kim, Youngjin Jung, Jeongmin Han, Ji-Hye Yun, Iksoo Chang, Weontae Lee

Abstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Evolution of Protein Structure and Stability in Global Warming.International journal of molecular sciences · 2020
    Review
  5. Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Heeyoun KimDepartment of Biochemistry, College of Life Science and Biotechnology, Yonsei University, Seoul, 120-740, Korea.
Sangyeol KimDepartment of Physics, Pusan National University, Busan, 609-735, Korea.
Youngjin JungDepartment of Biochemistry, College of Life Science and Biotechnology, Yonsei University, Seoul, 120-740, Korea.
Jeongmin HanDepartment of Biochemistry, College of Life Science and Biotechnology, Yonsei University, Seoul, 120-740, Korea.
Ji-Hye YunDepartment of Biochemistry, College of Life Science and Biotechnology, Yonsei University, Seoul, 120-740, Korea.
Iksoo ChangCenter for Proteome Biophysics, Daegu Gyeongbuk Institute of Science and Technology (DGIST), Daegu, 711-873, Korea.
Weontae LeeDepartment of Biochemistry, College of Life Science and Biotechnology, Yonsei University, Seoul, 120-740, Korea.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The folding mechanism of typical proteins has been studied widely, while our understanding of the origin of the high stability of thermophilic proteins is still elusive. Of particular interest is how an atypical thermophilic protein with a novel fold maintains its structure and stability under extreme conditions. Folding-unfolding transitions of MTH1880, a thermophilic protein from Methanobacterium thermoautotrophicum, induced by heat, urea, and GdnHCl, were investigated using spectroscopic techniques including circular dichorism, fluorescence, NMR combined with molecular dynamics (MD) simulations. Our results suggest that MTH1880 undergoes a two-state N to D transition and it is extremely stable against temperature and denaturants. The reversibility of refolding was confirmed by spectroscopic methods and size exclusion chromatography. We found that the hyper-stability of the thermophilic MTH1880 protein originates from an extensive network of both electrostatic and hydrophobic interactions coordinated by the central β-sheet. Spectroscopic measurements, in combination with computational simulations, have helped to clarify the thermodynamic and structural basis for hyper-stability of the novel thermophilic protein MTH1880.

Indexed as

Protein FoldingProtein UnfoldingThermodynamicsArchaeal ProteinsCircular DichroismModels, MolecularProtein ConformationProtein DenaturationTemperatureUreaArchaeal ProteinsUrea

Identifiers

PMID26766214
PMCPMC4713090

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.