Evidence map›Paper›PMID 26764600›Full record

ArticleCell host & microbe2016

Homeostatic Control of Innate Lung Inflammation by Vici Syndrome Gene Epg5 and Additional Autophagy Genes Promotes Influenza Pathogenesis.

Qun Lu, Christine C Yokoyama, Jesse W Williams, Megan T Baldridge, Xiaohua Jin, Brittany DesRochers, Traci Bricker, Craig B Wilen, Juhi Bagaitkar, Ekaterina Loginicheva and 16 more

Open access · bronzeAbstract read
In one paragraph

Article in Cell host & microbe, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 65 papers.

0numbers the graph read from it
0cells of the map it votes in
65citing papers in PubMed
11.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

65 citing papers in PubMed, 99 citations in OpenAlex.

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5 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

26 authors at 6 institutions in 3 countries.

Qun LuDepartment of Pathology and Immunology, Washington University School of Medicine, St. Louis, MO 63110, USA.
Christine C YokoyamaDepartment of Pathology and Immunology, Washington University School of Medicine, St. Louis, MO 63110, USA.
Jesse W WilliamsDepartment of Pathology and Immunology, Washington University School of Medicine, St. Louis, MO 63110, USA.
Megan T BaldridgeDepartment of Pathology and Immunology, Washington University School of Medicine, St. Louis, MO 63110, USA.
Xiaohua JinDepartment of Internal Medicine (Pulmonary and Critical Care Medicine), Washington University School of Medicine, St. Louis, MO 63110, USA.
Brittany DesRochersDepartment of Internal Medicine (Pulmonary and Critical Care Medicine), Washington University School of Medicine, St. Louis, MO 63110, USA.
Traci BrickerDepartment of Internal Medicine (Pulmonary and Critical Care Medicine), Washington University School of Medicine, St. Louis, MO 63110, USA.
Craig B WilenDepartment of Pathology and Immunology, Washington University School of Medicine, St. Louis, MO 63110, USA.
Juhi BagaitkarDepartment of Pathology and Immunology, Washington University School of Medicine, St. Louis, MO 63110, USA; Department of Pediatrics (Hematology/Oncology), Washington University School of Medicine, St. Louis, MO 63110, USA.
Ekaterina LoginichevaDepartment of Pathology and Immunology, Washington University School of Medicine, St. Louis, MO 63110, USA.
Alexey SergushichevDepartment of Pathology and Immunology, Washington University School of Medicine, St. Louis, MO 63110, USA; Computer Technologies Department, ITMO University, St. Petersburg 197101, Russia.
Darren KreamalmeyerDepartment of Pathology and Immunology, Washington University School of Medicine, St. Louis, MO 63110, USA.
Brian C KellerDepartment of Pathology and Immunology, Washington University School of Medicine, St. Louis, MO 63110, USA; Department of Internal Medicine (Pulmonary and Critical Care Medicine), Washington University School of Medicine, St. Louis, MO 63110, USA.
Yan ZhaoState Key Laboratory of Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, China.
Amal KambalDepartment of Pathology and Immunology, Washington University School of Medicine, St. Louis, MO 63110, USA.
Douglas R GreenDepartment of Immunology, St. Jude Children's Research Hospital, Memphis, TN 38105, USA.
Jennifer MartinezImmunity, Inflammation, and Disease Laboratory, NIEHS, National Institutes of Health, Research Triangle Park, NC 27703, USA.
Mary C DinauerDepartment of Pathology and Immunology, Washington University School of Medicine, St. Louis, MO 63110, USA; Department of Pediatrics (Hematology/Oncology), Washington University School of Medicine, St. Louis, MO 63110, USA.
Michael J HoltzmanDepartment of Internal Medicine (Pulmonary and Critical Care Medicine), Washington University School of Medicine, St. Louis, MO 63110, USA.
Erika C CrouchDepartment of Pathology and Immunology, Washington University School of Medicine, St. Louis, MO 63110, USA.
Wandy BeattyDepartment of Molecular Microbiology, Washington University School of Medicine, St. Louis, MO 63110, USA.
Adrianus C M BoonDepartment of Internal Medicine (Pulmonary and Critical Care Medicine), Washington University School of Medicine, St. Louis, MO 63110, USA.
Hong ZhangState Key Laboratory of Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, China.
Gwendalyn J RandolphDepartment of Pathology and Immunology, Washington University School of Medicine, St. Louis, MO 63110, USA.
Maxim N ArtyomovDepartment of Pathology and Immunology, Washington University School of Medicine, St. Louis, MO 63110, USA.
Herbert W VirginDepartment of Pathology and Immunology, Washington University School of Medicine, St. Louis, MO 63110, USA. Electronic address: virgin@wustl.edu.
Washington University in St. Louis · USChinese Academy of Sciences · CNInstitute of Biophysics · CNITMO University · RUNational Institutes of Health · USSt. Jude Children's Research Hospital · US

Funding

Genetic and Pathway Analysis CoreU19AI109725 · NIAID · WASHINGTON UNIVERSITY · PI ALLEN, PAUL M · 2014 to 2018
$32.7M
Tissue and Cell Processing CoreU19AI070489 · NIAID · WASHINGTON UNIVERSITY · PI HOLTZMAN, MICHAEL J · 2006 to 2016
$17.9M
PRINCIPLES IN PULMONARY RESEARCHT32HL007317 · NHLBI · WASHINGTON UNIVERSITY · PI Steven Brody, Michael J Holtzman · 1985 to 2026
$16.1M
DIABETES &RELATED METABOLIC DISEASEST32DK007120 · NIDDK · WASHINGTON UNIVERSITY · PI MARCO COLONNA, Maria Sara Remedi · 1986 to 2026
$15.7M
TRAINING PROGRAM IN IMMUNOLOGY AND IMMUNOGENETICST32AI007163 · NIAID · WASHINGTON UNIVERSITY · PI Kenneth M Murphy, Kodi S Ravichandran · 1985 to 2026
$14.8M
TRAINING IN THE IMMUNOBIOLOGY AND MOLECULAR CELL BIOLOGY OF CANCERT32CA009547 · NCI · WASHINGTON UNIVERSITY · PI ROBERT DAVID SCHREIBER · 1986 to 2026
$12.1M
Characterization of the molecular mechanisms of LC3-associated phagocytosis and its role in disease pathogenesisZIAES103286 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI MARTINEZ, JENNIFER · 2015 to 2021
$9.2M
Non-canonical functions of autophagy proteinsR01AI040646 · NIAID · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI GREEN, DOUGLAS R. · 1997 to 2023
$8.6M
Differentiation/migratory fate of monocyte-derived cellsR01AI049653 · NIAID · WASHINGTON UNIVERSITY · PI Gwendalyn J Randolph · 2000 to 2026
$4.6M
DIFFERENTIATION AND FUNCTION OF MONOCYTES AND MACROPHAGESR37AI049653 · NIAID · WASHINGTON UNIVERSITY · PI RANDOLPH, GWENDALYN J · 2016 to 2025
$4.3M
CELL BIOLOGIC APPROACHES TO DIABETES RESEARCHT32DK007296 · NIDDK · WASHINGTON UNIVERSITY · PI COLONNA, MARCO · 1986 to 2014
$3.3M
IL-33 AND EXCESS MUCUS PRODUCTIONR01HL121791 · NHLBI · WASHINGTON UNIVERSITY · PI HOLTZMAN, MICHAEL J · 2014 to 2017
$1.9M
Howard Hughes Medical InstituteIntramural NIH HHS Z99 ES999999Intramural NIH HHS ZIA ES103286NCI NIH HHS T32 CA009547NCI NIH HHS T32CA009547NHLBI NIH HHS R01 HL121791NHLBI NIH HHS R01HL121791NHLBI NIH HHS T32 HL007317NHLBI NIH HHS T32HL07317NIAID NIH HHS AI049653NIAID NIH HHS R01 AI040646NIAID NIH HHS R01 AI049653NIAID NIH HHS R01 AI111605NIAID NIH HHS R01AI111605NIAID NIH HHS R37 AI049653NIAID NIH HHS T32 AI007163NIAID NIH HHS T32AI007163NIAID NIH HHS U19 AI070489NIAID NIH HHS U19AI070489NIAID NIH HHS U19 AI109725NIAID NIH HHS U19AI109725NIDDK NIH HHS T32 DK007120NIDDK NIH HHS T32 DK007296NIDDK NIH HHS T32DK7296
6 · The paper itself

Abstract

Mutations in the autophagy gene EPG5 are linked to the multisystem human disease Vici syndrome, which is characterized in part by pulmonary abnormalities, including recurrent infections. We found that Epg5-deficient mice exhibited elevated baseline innate immune cellular and cytokine-based lung inflammation and were resistant to lethal influenza virus infection. Lung transcriptomics, bone marrow transplantation experiments, and analysis of cellular cytokine expression indicated that Epg5 plays a role in lung physiology through its function in macrophages. Deletion of other autophagy genes including Atg14, Fip200, Atg5, and Atg7 in myeloid cells also led to elevated basal lung inflammation and influenza resistance. This suggests that Epg5 and other Atg genes function in macrophages to limit innate immune inflammation in the lung. Disruption of this normal homeostatic dampening of lung inflammation results in increased resistance to influenza, suggesting that normal homeostatic mechanisms that limit basal tissue inflammation support some infectious diseases.

Indexed as

Immunity, InnateAnimalsAutophagy-Related Protein 7Autophagy-Related ProteinsHomeostasisHumansInfluenza A Virus, H1N1 SubtypeInfluenza, HumanMacrophagesMiceMice, KnockoutMicrotubule-Associated ProteinsPneumoniaProteinsVesicular Transport ProteinsAtg14 protein, mouseAtg7 protein, mouseAutophagy-Related Protein 7Autophagy-Related ProteinsEpg5 protein, mouseMicrotubule-Associated ProteinsProteinsVesicular Transport Proteins

Identifiers

PMID26764600
PMCPMC4714358
OpenAlexW2238641150

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.