Evidence map›Paper›PMID 26764594›Full record

ArticleCell host & microbe2016

Genetic and Metabolic Signals during Acute Enteric Bacterial Infection Alter the Microbiota and Drive Progression to Chronic Inflammatory Disease.

Karishma Kamdar, Samira Khakpour, Jingyu Chen, Vanessa Leone, Jennifer Brulc, Thomas Mangatu, Dionysios A Antonopoulos, Eugene B Chang, Stacy A Kahn, Barbara S Kirschner and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Cell host & microbe, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed
7.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed, 98 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Impact ofPathogens (Basel, Switzerland) · 2024
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  12. Enhancing resistance toFrontiers in microbiology · 2024
    Article
  13. Article
  14. Review
  15. The oral microbiome in autoimmune diseases: friend or foe?Journal of translational medicine · 2023
    Review
  16. Article
  17. Review
  18. Yersinia enterocolitica in Crohn's disease.Frontiers in cellular and infection microbiology · 2023
    Review
  19. Effects ofArchives of medical science : AMS · 2023
    Article
  20. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 2 countries.

Karishma KamdarDepartment of Molecular Microbiology and Immunology, University of Southern California, Los Angeles, CA 90089, USA.
Samira KhakpourDepartment of Medicine, Section of Gastroenterology, University of Chicago, Chicago, IL 60637, USA.
Jingyu ChenCollege of Food Science and Nutritional Engineering, China Agricultural University, Beijing 100083, China; Department of Food Science and Technology, University of California, Davis, Davis, CA 95616, USA.
Vanessa LeoneDepartment of Medicine, Section of Gastroenterology, University of Chicago, Chicago, IL 60637, USA.
Jennifer BrulcArgonne National Laboratory, Argonne, IL 60439, USA.
Thomas MangatuDepartment of Medicine, Section of Gastroenterology, University of Chicago, Chicago, IL 60637, USA; Department of Pediatrics Section of Pediatric Gastroenterology, Hepatology, & Nutrition, University of Chicago, Chicago, IL 60637, USA.
Dionysios A AntonopoulosDepartment of Medicine, Section of Gastroenterology, University of Chicago, Chicago, IL 60637, USA; Argonne National Laboratory, Argonne, IL 60439, USA.
Eugene B ChangDepartment of Medicine, Section of Gastroenterology, University of Chicago, Chicago, IL 60637, USA.
Stacy A KahnDepartment of Medicine, Section of Gastroenterology, University of Chicago, Chicago, IL 60637, USA; Department of Pediatrics Section of Pediatric Gastroenterology, Hepatology, & Nutrition, University of Chicago, Chicago, IL 60637, USA.
Barbara S KirschnerDepartment of Medicine, Section of Gastroenterology, University of Chicago, Chicago, IL 60637, USA; Department of Pediatrics Section of Pediatric Gastroenterology, Hepatology, & Nutrition, University of Chicago, Chicago, IL 60637, USA.
Glenn YoungDepartment of Food Science and Technology, University of California, Davis, Davis, CA 95616, USA.
R William DePaoloDepartment of Molecular Microbiology and Immunology, University of Southern California, Los Angeles, CA 90089, USA. Electronic address: william.depaolo@med.usc.edu.
University of Chicago · USUniversity of Southern California · USArgonne National Laboratory · USChina Agricultural University · CNUniversity of California, Davis · US

Funding

Endogenous TLR1 signals prevent uncontrolled innate immunity in the colonR01DK104908 · NIDDK · UNIVERSITY OF WASHINGTON · PI DEPAOLO, R WILLIAM · 2015 to 2019
$1.8M
The impact of TLR1 on dysbiosis and intestinal inflammationR03DK097442 · NIDDK · UNIVERSITY OF SOUTHERN CALIFORNIA · PI DEPAOLO, R WILLIAM · 2013 to 2014
$164k
NIDDK NIH HHS R01 DK104908NIDDK NIH HHS R01DK104908NIDDK NIH HHS R03 DK097442NIDDK NIH HHS R03DK097442
6 · The paper itself

Abstract

Chronic inflammatory disorders are thought to arise due to an interplay between predisposing host genetics and environmental factors. For example, the onset of inflammatory bowel disease is associated with enteric proteobacterial infection, yet the mechanistic basis for this association is unclear. We have shown previously that genetic defiency in TLR1 promotes acute enteric infection by the proteobacteria Yersinia enterocolitica. Examining that model further, we uncovered an altered cellular immune response that promotes the recruitment of neutrophils which in turn increases metabolism of the respiratory electron acceptor tetrathionate by Yersinia. These events drive permanent alterations in anti-commensal immunity, microbiota composition, and chronic inflammation, which persist long after Yersinia clearence. Deletion of the bacterial genes involved in tetrathionate respiration or treatment using targeted probiotics could prevent microbiota alterations and inflammation. Thus, acute infection can drive long term immune and microbiota alterations leading to chronic inflammatory disease in genetically predisposed individuals.

Indexed as

Gastrointestinal MicrobiomeAnimalsChronic DiseaseDisease ProgressionFemaleHumansInflammatory Bowel DiseasesIntestinal MucosaMaleMiceMice, KnockoutToll-Like Receptor 1Yersinia enterocoliticaYersinia InfectionsToll-Like Receptor 1

Identifiers

PMID26764594
PMCPMC4839196
OpenAlexW2235333377

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.