Evidence map›Paper›PMID 26762145›Full record

ArticleRetrovirology2016

Enhancement of HIV-1 infection and intestinal CD4+ T cell depletion ex vivo by gut microbes altered during chronic HIV-1 infection.

Stephanie M Dillon, Eric J Lee, Andrew M Donovan, Kejun Guo, Michael S Harper, Daniel N Frank, Martin D McCarter, Mario L Santiago, Cara C Wilson

Open access · goldAbstract read
In one paragraph

Article in Retrovirology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed, 1 pooled it
6.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 1 synthesis or guideline pooled it, 69 citations in OpenAlex.

  1. Gut Microbiome Changes Associated With HIV Infection and Sexual Orientation.Frontiers in cellular and infection microbiology · 2020
    Pooled it
  2. Trial
  3. The GenusMolecules (Basel, Switzerland) · 2026
    Review
  4. Review
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Gut Innate Immunity and HIV Pathogenesis.Current HIV/AIDS reports · 2021
    Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. The gut microbiome and frailty.Translational research : the journal of laboratory and clinical medicine · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Stephanie M DillonDepartment of Medicine, University of Colorado Anschutz Medical Campus, Aurora, CO, USA. Stephanie.Dillon@ucdenver.edu.
Eric J LeeDepartment of Medicine, University of Colorado Anschutz Medical Campus, Aurora, CO, USA. Eric.Lee@ucdenver.edu.
Andrew M DonovanDepartment of Medicine, University of Colorado Anschutz Medical Campus, Aurora, CO, USA. Andrew.Donovan@ucdenver.edu.
Kejun GuoDepartment of Medicine, University of Colorado Anschutz Medical Campus, Aurora, CO, USA. Kejun.Guo@ucdenver.edu.
Michael S HarperDepartment of Medicine, University of Colorado Anschutz Medical Campus, Aurora, CO, USA. Michael.Harper@ucdenver.edu.
Daniel N FrankDepartment of Medicine, University of Colorado Anschutz Medical Campus, Aurora, CO, USA. Daniel.Frank@ucdenver.edu.
Martin D McCarterDepartment of Surgery, University of Colorado Anschutz Medical Campus, Aurora, CO, USA. Martin.McCarter@ucdenver.edu.
Mario L SantiagoDepartment of Medicine, University of Colorado Anschutz Medical Campus, Aurora, CO, USA. Mario.Santiago@ucdenver.edu.
Cara C WilsonDepartment of Medicine, University of Colorado Anschutz Medical Campus, Aurora, CO, USA. cara.wilson@ucdenver.edu.
University of Colorado Anschutz Medical Campus · US

Funding

Colorado Clinical and Translational Sciences InstituteUL1TR001082 · NCATS · UNIVERSITY OF COLORADO DENVER · PI SOKOL, RONALD J. · 2013 to 2017
$48.0M
PILOT STUDY--SUBSTRATE METABOLISM IN EXTREMELY LOW BIRTH WEIGHT INFANTSP30DK048520 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI Wendy M Kohrt · 1995 to 2026
$32.6M
Colorado Clinical and Translational Science Institute (UL1)UL1TR000154 · NCATS · UNIVERSITY OF COLORADO DENVER · PI SOKOL, RONALD J. · 2012 to 2013
$20.4M
Medical Scientist Training ProgramT32GM008497 · NIGMS · UNIVERSITY OF COLORADO DENVER · PI WILSON, CARA C. · 1993 to 2022
$15.2M
Mechanisms of HIV-associated Gut T Cell DepletionR01AI108404 · NIAID · UNIVERSITY OF COLORADO DENVER · PI WILSON, CARA C. · 2013 to 2017
$2.3M
Mechanisms of HIV-associated Disruption of Intestinal HomeostasisR01DK088663 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI WILSON, CARA C. · 2010 to 2013
$1.6M
HIV-Associated Interferon Effector Mechanisms in the GALTR56AI116271 · NIAID · UNIVERSITY OF COLORADO DENVER · PI SANTIAGO, MARIO LUIS, WILSON, CARA C. · 2015 to 2015
$491k
NCATS NIH HHS UL1 TR000154NCATS NIH HHS UL1 TR001082NIAID NIH HHS R01 AI108404NIAID NIH HHS R56 AI116271NIDDK NIH HHS R01 DK088663NIGMS NIH HHS T32 GM008497
6 · The paper itself

Abstract

backgroundEarly HIV-1 infection is characterized by high levels of HIV-1 replication and substantial CD4 T cell depletion in the intestinal mucosa, intestinal epithelial barrier breakdown, and microbial translocation. HIV-1-induced disruption of intestinal homeostasis has also been associated with changes in the intestinal microbiome that are linked to mucosal and systemic immune activation. In this study, we investigated the impact of representative bacterial species that were altered in the colonic mucosa of viremic HIV-1 infected individuals (HIV-altered mucosal bacteria; HAMB) on intestinal CD4 T cell function, infection by HIV-1, and survival in vitro. Lamina propria (LP) mononuclear cells were infected with CCR5-tropic HIV-1BaL or mock infected, exposed to high (3 gram-negative) or low (2 gram-positive) abundance HAMB or control gram-negative Escherichia coli and levels of productive HIV-1 infection and CD4 T cell depletion assessed. HAMB-associated changes in LP CD4 T cell activation, proliferation and HIV-1 co-receptor expression were also evaluated.

resultsThe majority of HAMB increased HIV-1 infection and depletion of LP CD4 T cells, but gram-negative HAMB enhanced CD4 T cell infection to a greater degree than gram-positive HAMB. Most gram-negative HAMB enhanced T cell infection to levels similar to that induced by gram-negative E. coli despite lower induction of T cell activation and proliferation by HAMB. Both gram-negative HAMB and E. coli significantly increased expression of HIV-1 co-receptor CCR5 on LP CD4 T cells. Lipopolysaccharide, a gram-negative bacteria cell wall component, up-regulated CCR5 expression on LP CD4 T cells whereas gram-positive cell wall lipoteichoic acid did not. Upregulation of CCR5 by gram-negative HAMB was largely abrogated in CD4 T cell-enriched cultures suggesting an indirect mode of stimulation.

conclusionsGram-negative commensal bacteria that are altered in abundance in the colonic mucosa of HIV-1 infected individuals have the capacity to enhance CCR5-tropic HIV-1 productive infection and depletion of LP CD4 T cells in vitro. Enhanced infection appears to be primarily mediated indirectly through increased expression of CCR5 on LP CD4 T cells without concomitant large scale T cell activation. This represents a novel mechanism potentially linking intestinal dysbiosis to HIV-1 mucosal pathogenesis.

Indexed as

DysbiosisImmunity, MucosalAdultCD4-Positive T-LymphocytesCross-Sectional StudiesFemaleGastrointestinal TractHIV-1HIV InfectionsHumansIntestinal MucosaMaleMiddle AgedYoung Adult

Identifiers

PMID26762145
PMCPMC4712466
OpenAlexW2234278768

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.