Evidence map›Paper›PMID 26761001›Full record

ArticleInternational journal of molecular sciences2016

Revealing the Effects of Missense Mutations Causing Snyder-Robinson Syndrome on the Stability and Dimerization of Spermine Synthase.

Yunhui Peng, Joy Norris, Charles Schwartz, Emil Alexov

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 38 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Article
  6. Article
  7. Structural Insights into the Mechanisms Underlying Polyaminopathies.International journal of molecular sciences · 2024
    Review
  8. Article
  9. Review
  10. Snyder-Robinson syndrome: differential diagnosis of osteogenesis imperfecta.Osteoporosis international : a journal established as result of cooperation between the European Foundation for Osteoporosis and the National Osteoporosis Foundation of the USA · 2022
    Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Computational Approaches to Prioritize Cancer Driver Missense Mutations.International journal of molecular sciences · 2018
    Review
  16. Article
  17. Article
  18. Functions of Polyamines in Mammals.The Journal of biological chemistry · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Yunhui PengComputational Biophysics and Bioinformatics, Clemson University, Clemson, SC 29634, USA. yunhuip@g.clemson.edu.
Joy NorrisGreenwood Genetic Center, Greenwood, SC 29646, USA. jwnorris@ggc.org.
Charles SchwartzGreenwood Genetic Center, Greenwood, SC 29646, USA. ceschwartz@ggc.org.
Emil AlexovComputational Biophysics and Bioinformatics, Clemson University, Clemson, SC 29634, USA. ealexov@clemson.edu.
Clemson University · USGreenwood Genetic Center · US

Funding

New Generation DelPhi: large systems and beyond electrostaticsR01GM093937 · NIGMS · CLEMSON UNIVERSITY · PI ALEXOV, EMIL GEORGIEV · 2010 to 2023
$4.3M
NIGMS NIH HHS R01 GM093937
6 · The paper itself

Abstract

Missense mutations in spermine synthase (SpmSyn) protein have been shown to cause the Snyder-Robinson syndrome (SRS). Depending on the location within the structure of SpmSyn and type of amino acid substitution, different mechanisms resulting in SRS were proposed. Here we focus on naturally occurring amino acid substitutions causing SRS, which are situated away from the active center of SpmSyn and thus are not directly involved in the catalysis. Two of the mutations, M35R and P112L, are reported for the first time in this study. It is demonstrated, both experimentally and computationally, that for such mutations the major effect resulting in dysfunctional SpmSyn is the destabilization of the protein. In vitro experiments indicated either no presence or very little amount of the mutant SpmSyn in patient cells. In silico modeling predicted that all studied mutations in this work destabilize SpmSyn and some of them abolish homo-dimer formation. Since dimerization and structural stability are equally important for the wild type function of SpmSyn, it is proposed that the SRS caused by mutations occurring in the N-domain of SpmSyn is a result of dysfunctional mutant proteins being partially unfolded and degraded by the proteomic machinery of the cell or being unable to form a homo-dimer.

Indexed as

Mutation, MissenseAmino Acid SequenceComputer SimulationEnzyme StabilityHumansModels, MolecularMolecular Sequence DataProtein FoldingProtein MultimerizationSequence AlignmentSpermine SynthaseX-Linked Intellectual DisabilitySpermine Synthasebinding affinity chargeenergy calculationsmissense mutationSnyder-Robinson syndromespermine synthase

Identifiers

PMID26761001
PMCPMC4730321
OpenAlexW2232365137

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.