Evidence map›Paper›PMID 26758921›Full record

ArticleBlood2016

Characterization of vitamin K-dependent carboxylase mutations that cause bleeding and nonbleeding disorders.

Jian-Ke Tie, Jorge D A Carneiro, Da-Yun Jin, Ciro D Martinhago, Cees Vermeer, Darrel W Stafford

Open access · bronzeAbstract readCase Reports
In one paragraph

Article in Blood, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed, 2 pooled it
3.0field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 2 syntheses or guidelines pooled it, 57 citations in OpenAlex.

  1. Guideline
  2. Pooled it
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    Review
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  19. Review
  20. Calcium Homeostasis in the Epididymal Microenvironment:Frontiers in cell and developmental biology · 2022
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 3 countries.

Jian-Ke TieDepartment of Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC;
Jorge D A CarneiroInstituto da Criança, Hospital das Clínicas, Faculdade de Medicina, Universidade de São Paulo, São Paulo, Brazil;
Da-Yun JinDepartment of Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC;
Ciro D MartinhagoChromosome Genomic Medicine, São Paulo, Brazil; and.
Cees VermeerR&D Group VitaK, Maastricht University, Maastricht, The Netherlands.
Darrel W StaffordDepartment of Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC;
University of North Carolina at Chapel Hill · USGenomic (Brazil) · BRHospital das Clínicas da Faculdade de Medicina da Universidade de São Paulo · BRMaastricht University · NL

Funding

Characterization of enzymes in the vitamin K cycleR01HL131690 · NHLBI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI STAFFORD, DARREL W, TIE, JIANKE · 2016 to 2023
$4.0M
Characterization of Vitamin K Epoxide ReductaseR01HL077740 · NHLBI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI STAFFORD, DARREL W, TIE, JIANKE · 2005 to 2015
$3.9M
NHLBI NIH HHS R01 HL077740NHLBI NIH HHS R01 HL131690
6 · The paper itself

Abstract

Vitamin K-dependent coagulation factors deficiency is a bleeding disorder mainly associated with mutations in γ-glutamyl carboxylase (GGCX) that often has fatal outcomes. Some patients with nonbleeding syndromes linked to GGCX mutations, however, show no coagulation abnormalities. The correlation between GGCX genotypes and their clinical phenotypes has been previously unknown. Here we report the identification and characterization of novel GGCX mutations in a patient with both severe cerebral bleeding disorder and comorbid Keutel syndrome, a nonbleeding malady caused by functional defects of matrix γ-carboxyglutamate protein (MGP). To characterize GGCX mutants in a cellular milieu, we established a cell-based assay by stably expressing 2 reporter proteins (a chimeric coagulation factor and MGP) in HEK293 cells. The endogenous GGCX gene in these cells was knocked out by CRISPR-Cas9-mediated genome editing. Our results show that, compared with wild-type GGCX, the patient's GGCX D153G mutant significantly decreased coagulation factor carboxylation and abolished MGP carboxylation at the physiological concentration of vitamin K. Higher vitamin K concentrations can restore up to 60% of coagulation factor carboxylation but do not ameliorate MGP carboxylation. These results are consistent with the clinical results obtained from the patient treated with vitamin K, suggesting that the D153G alteration in GGCX is the causative mutation for both the bleeding and nonbleeding disorders in our patient. These findings provide the first evidence of a GGCX mutation resulting in 2 distinct clinical phenotypes; the established cell-based assay provides a powerful tool for studying the clinical consequences of naturally occurring GGCX mutations in vivo.

Indexed as

MutationAbnormalities, MultipleAmino Acid SequenceBase SequenceBlood Coagulation TestsCalcinosisCalcium-Binding ProteinsCarbon-Carbon LigasesCartilage DiseasesCRISPR-Cas SystemsDNA Mutational AnalysisExtracellular Matrix ProteinsFemaleGenes, ReporterGenetic Association StudiesGenotypeCalcium-Binding ProteinsCarbon-Carbon LigasesExtracellular Matrix Proteinsglutamyl carboxylaseMatrix Gla Protein

Identifiers

PMID26758921
PMCPMC4832504
OpenAlexW2235973221

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.