Evidence map›Paper›PMID 26758880›Full record

ArticleProtoplasma2017

Decondensation of chromosomal 45S rDNA sites in Lolium and Festuca genotypes does not result in karyotype instability.

Laiane Corsini Rocha, Maja Jankowska, Joerg Fuchs, Andréa Mittelmann, Vânia Helena Techio, Andreas Houben

Abstract read
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In one paragraph

Article in Protoplasma, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
5.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 16 citations in OpenAlex.

  1. Review
  2. Initial Description of the Genome ofFrontiers in plant science · 2022
    Article
  3. Mechanisms driving acentric chromosome transmission.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2020
    Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. The genome structure ofComparative cytogenetics · 2018
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Laiane Corsini RochaDepartment of Biology, Federal University of Lavras-UFLA, Lavras, Minas Gerais State, Brazil.
Maja JankowskaLeibniz Institute of Plant Genetics and Crop Plant Research (IPK), OT Gatersleben, 06466, StadtSeeland, Germany.
Joerg FuchsLeibniz Institute of Plant Genetics and Crop Plant Research (IPK), OT Gatersleben, 06466, StadtSeeland, Germany.
Andréa MittelmannEmbrapa Dairy Cattle/Embrapa Temperate Agriculture, Pelotas, Rio Grande do Sul State, Brazil.
Vânia Helena TechioDepartment of Biology, Federal University of Lavras-UFLA, Lavras, Minas Gerais State, Brazil. vhtechio@gmail.com.
Andreas HoubenLeibniz Institute of Plant Genetics and Crop Plant Research (IPK), OT Gatersleben, 06466, StadtSeeland, Germany. houben@ipk-gatersleben.de.
Leibniz Institute of Plant Genetics and Crop Plant Research · DEUniversidade Federal de Lavras · BRBrazilian Agricultural Research Corporation · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fragile sites (FSs) in plants have been described for species like Lolium and other grasses. Whereas in humans FSs were shown to be involved in genome instabilities; the consequences of FSs expression in plants are not known yet. To evaluate whether FSs cause karyotype instabilities, we assessed the frequency of micronuclei and lagging chromosomes in meristematic cells, the stability of the DNA content, and the occurrence of neocentromeres in the presumed chromosomal fragments of Lolium perenne, Lolium multiflorum, Festuca arrundinacea, and two Festulolium hybrids. The cell cycle analysis along with flow cytometric genome size measurements showed high stability in all genomes evaluated. Neocentromeric activity was neither observed in the presumed fragments nor in any other chromosomal region, then this is not the mechanism responsible by the stability. However, Fluorescence in situ hybridization (FISH) with a 45S ribosomal DNA (rDNA) probe in combination with YOYO staining of metaphasic chromosomes showed that many extended nucleolus organizing region (NOR) form very thin YOYO-positive chromatin fibers connecting the acentric 'fragment' with the centromere-containing chromosome region. The obtained data indicate that the expression of FSs does not result in genome instabilities or neocentromere formation. The FS-containing 45S rDNA carrying chromatin fibers undergo a cell cycle and gene activity-dependent dynamic decondensation process.

Indexed as

Genomic InstabilityKaryotypeCell CountChromosome Fragile SitesChromosomes, PlantFestucaFlow CytometryGenotypeIn Situ Hybridization, FluorescenceLoliumMetaphaseRNA, RibosomalRNA, RibosomalRNA, ribosomal, 45SChromatin fiberDNA contentForage grassFragile sitesGenomic stabilityLolium-Festuca complex

Identifiers

PMID26758880
OpenAlexW2246080822

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.