Evidence map›Paper›PMID 26758761›Full record

ArticleBMC genomics2016

Slowed aging during reproductive dormancy is reflected in genome-wide transcriptome changes in Drosophila melanogaster.

Lucie Kučerová, Olga I Kubrak, Jonas M Bengtsson, Hynek Strnad, Sören Nylin, Ulrich Theopold, Dick R Nässel

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
5.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 97 citations in OpenAlex.

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  13. International journal of molecular sciences · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Lucie KučerováDepartment of Molecular Biosciences, Wenner-Gren Institute, Stockholm, Sweden. lucie.kucerova@su.se.
Olga I KubrakDepartment of Zoology, Stockholm University, S-106 91, Stockholm, Sweden. olga.kubrak@zoologi.su.se.
Jonas M BengtssonDepartment of Zoology, Stockholm University, S-106 91, Stockholm, Sweden. jonas.bengtsson@zoologi.su.se.
Hynek StrnadInstitute of Molecular Genetics, Academy of Sciences of the Czech Republic, Prague, Czech Republic. strnad@img.cas.cz.
Sören NylinDepartment of Zoology, Stockholm University, S-106 91, Stockholm, Sweden. soren.nylin@zoologi.su.se.
Ulrich TheopoldDepartment of Molecular Biosciences, Wenner-Gren Institute, Stockholm, Sweden. uli.theopold@su.se.
Dick R NässelDepartment of Zoology, Stockholm University, S-106 91, Stockholm, Sweden. dnassel@zoologi.su.se.
Stockholm University · SEWenner-Gren Foundations · SECzech Academy of Sciences · CZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundIn models extensively used in studies of aging and extended lifespan, such as C. elegans and Drosophila, adult senescence is regulated by gene networks that are likely to be similar to ones that underlie lifespan extension during dormancy. These include the evolutionarily conserved insulin/IGF, TOR and germ line-signaling pathways. Dormancy, also known as dauer stage in the larval worm or adult diapause in the fly, is triggered by adverse environmental conditions, and results in drastically extended lifespan with negligible senescence. It is furthermore characterized by increased stress resistance and somatic maintenance, developmental arrest and reallocated energy resources. In the fly Drosophila melanogaster adult reproductive diapause is additionally manifested in arrested ovary development, improved immune defense and altered metabolism. However, the molecular mechanisms behind this adaptive lifespan extension are not well understood.

resultsA genome wide analysis of transcript changes in diapausing D. melanogaster revealed a differential regulation of more than 4600 genes. Gene ontology (GO) and KEGG pathway analysis reveal that many of these genes are part of signaling pathways that regulate metabolism, stress responses, detoxification, immunity, protein synthesis and processes during aging. More specifically, gene readouts and detailed mapping of the pathways indicate downregulation of insulin-IGF (IIS), target of rapamycin (TOR) and MAP kinase signaling, whereas Toll-dependent immune signaling, Jun-N-terminal kinase (JNK) and Janus kinase/signal transducer and activator of transcription (JAK/STAT) pathways are upregulated during diapause. Furthermore, we detected transcriptional regulation of a large number of genes specifically associated with aging and longevity.

conclusionsWe find that many affected genes and signal pathways are shared between dormancy, aging and lifespan extension, including IIS, TOR, JAK/STAT and JNK. A substantial fraction of the genes affected by diapause have also been found to alter their expression in response to starvation and cold exposure in D. melanogaster, and the pathways overlap those reported in GO analysis of other invertebrates in dormancy or even hibernating mammals. Our study, thus, shows that D. melanogaster is a genetically tractable model for dormancy in other organisms and effects of dormancy on aging and lifespan.

Indexed as

Gene Expression RegulationAgingAnimalsDrosophila melanogasterGene OntologyGenome, InsectGerm CellsInsulinLongevityReproductionSignal TransductionTranscriptomeInsulin

Identifiers

PMID26758761
PMCPMC4711038
OpenAlexW2237297286

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.