ArticleMolecular genetics and genomics : MGG2016
Loci and candidate gene identification for resistance to Phytophthora sojae via association analysis in soybean [Glycine max (L.) Merr].
Article in Molecular genetics and genomics : MGG, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.
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Who cites it
21 citing papers in PubMed, 31 citations in OpenAlex.
- Genome-Wide Association Study and Marker Development forInternational journal of molecular sciences · 2024Article
- Deciphering the genetic architecture of resistance toFrontiers in plant science · 2023Article
- Breeding for disease resistance in soybean: a global perspective.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022Review
- Genome-Wide Association Study of Partial Resistance toCurrent issues in molecular biology · 2022Article
- Mapping of partial resistance to Phytophthora sojae in soybean PIs using whole-genome sequencing reveals a major QTL.The plant genome · 2022Article
- Progress and prospectus in genetics and genomics ofFrontiers in genetics · 2022Review
- Genome-wide association study and selection for field resistance to cassava root rot disease and productive traits.PloS one · 2022Article
- Deep learning-based phenotyping for genome wide association studies of sudden death syndrome in soybean.Frontiers in plant science · 2022Article
- Genome-wide association study for grain mineral content in a Brazilian common bean diversity panel.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021Article
- Natural variation in the promoter of GsERD15B affects salt tolerance in soybean.Plant biotechnology journal · 2021Article
- Exploring genetic architecture for pod-related traits in soybean using image-based phenotyping.Molecular breeding : new strategies in plant improvement · 2021Article
- Testing methods and statistical models of genomic prediction for quantitative disease resistance to Phytophthora sojae in soybean [Glycine max (L.) Merr] germplasm collections.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020Article
- Identification of quantitative trait nucleotides and candidate genes for soybean seed weight by multiple models of genome-wide association study.BMC plant biology · 2020Article
- Article
- Dissecting the Genetic Architecture of Seed Protein and Oil Content in Soybean from the Yangtze and Huaihe River Valleys Using Multi-Locus Genome-Wide Association Studies.International journal of molecular sciences · 2019Article
- Genome-Wide Association Studies for Dynamic Plant Height and Number of Nodes on the Main Stem in Summer Sowing Soybeans.Frontiers in plant science · 2018Article
- Identification of Major Quantitative Trait Loci for Seed Oil Content in Soybeans by Combining Linkage and Genome-Wide Association Mapping.Frontiers in plant science · 2017Article
- Genetic Architecture of Charcoal Rot (Frontiers in plant science · 2017Article
- Article
- Genome-wide association mapping of partial resistance to Phytophthora sojae in soybean plant introductions from the Republic of Korea.BMC genomics · 2016Article
Corrections and comments
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Authors and funding
8 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Phytophthora sojae is an oomycete soil-borne plant pathogen that causes the serious disease Phytophthora root rot in soybean, leading to great loss of soybean production every year. Understanding the genetic basis of this plant-pathogen interaction is important to improve soybean disease resistance. To discover genes or QTLs underlying naturally occurring variations in soybean P.sojae resistance, we performed a genome-wide association study using 59,845 single-nucleotide polymorphisms identified from re-sequencing of 279 accessions from Yangtze-Huai soybean breeding germplasm. We used two models for association analysis. The same strong peak was detected by both two models on chromosome 13. Within the 500-kb flanking regions, three candidate genes (Glyma13g32980, Glyma13g33900, Glyma13g33512) had SNPs in their exon regions. Four other genes were located in this region, two of which contained a leucine-rich repeat domain, which is an important characteristic of R genes in plants. These candidate genes could be potentially useful for improving the resistance of cultivated soybean to P.sojae in future soybean breeding.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.