Evidence map›Paper›PMID 26758070›Full record

ArticleInternational ophthalmology2016

LOXL1 gene analysis in Turkish patients with exfoliation glaucoma.

Suzan Guven Yilmaz, Melis Palamar, Huseyin Onay, Orhan Ilim, Ayca Aykut, Feristah Ferda Ozkinay, Ayse Yagci

Abstract read
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In one paragraph

Article in International ophthalmology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it, 15 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. DNA Polymorphism of theJournal of ophthalmology · 2022
    Article
  4. Review
  5. Article
  6. Three Single Nucleotide Polymorphisms ofTurkish journal of ophthalmology · 2018
    Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Suzan Guven YilmazDepartment of Ophthalmology, Faculty of Medicine, Ege University, Goz Hast. AD, Bornova, 35040, Izmir, Turkey. drsuzan2003@yahoo.com.
Melis PalamarDepartment of Ophthalmology, Faculty of Medicine, Ege University, Goz Hast. AD, Bornova, 35040, Izmir, Turkey.
Huseyin OnayDepartment of Medical Genetics, Faculty of Medicine, Ege University, Izmir, Turkey.
Orhan IlimDepartment of Ophthalmology, Faculty of Medicine, Ege University, Goz Hast. AD, Bornova, 35040, Izmir, Turkey.
Ayca AykutDepartment of Medical Genetics, Faculty of Medicine, Ege University, Izmir, Turkey.
Feristah Ferda OzkinayDepartment of Medical Genetics, Faculty of Medicine, Ege University, Izmir, Turkey.
Ayse YagciDepartment of Ophthalmology, Faculty of Medicine, Ege University, Goz Hast. AD, Bornova, 35040, Izmir, Turkey.
Ege University · TR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The purpose of this study is to evaluate whole lysyl oxidase like 1 (LOXL1) gene by sequence analysis in Turkish patients with exfoliation glaucoma (XFG). A total of 48 (35 male, 13 female) patients with XFG were enrolled. Besides routine ophthalmological examination, peripapillary retinal nerve fibre layer (RNFL) analysis with optic coherence tomography was performed. Blood samples of 2 ml with EDTA were obtained and sent to Medical Genetics Department, Molecular Genetics Laboratory for LOXL1 polymorphism (PCR and agarose gel imaging) analysis. The role of the detected changes on disease severity was evaluated. No LOXL1 gene mutations in any of the patients were detected. Three types of single-nucleotide polymorphisms (SNPs) including R141L(rs1048661), A320A(rs41435250), and F184F were detected in 17 (35.3 %) patients. When compared, SNP-positive patients had thinner RNFL than SNP-negative patients (64.5 ± 17.6 and 66.1 ± 20.4 µ, respectively), and SNP-positive patients had higher cupping/disc ratio than SNP-negative patients (0.76 ± 0.2 and 0.70 ± 0.3, respectively). However, both values were not statistically significant (p = 0.966 and p = 0.539, respectively). When compared, R141L-positive patients had significantly thinner cornea thickness (516.11 ± 30.3 µ) than R141L-negative patients (556.69 ± 27.2 µ) (p = 0.004). There was not any statistical significant difference in the means of age, gender, BCVA, MD, PSD, IOP, number of hypotensive agents, and percent of glaucoma surgery (p > 0.05). In this study group of Turkish population, no LOXL1 mutations were found. No associations between the defined SNPs (A320A, R141L and F184F) and the severity of the disease were detected.

Indexed as

MutationPolymorphism, Single NucleotideAgedAged, 80 and overAmino Acid OxidoreductasesCross-Sectional StudiesDNA Mutational AnalysisExfoliation SyndromeFemaleHumansMaleMiddle AgedNerve FibersPolymerase Chain ReactionProspective StudiesRetinal Ganglion CellsAmino Acid OxidoreductasesLOXL1 protein, humanExfoliative glaucomaExfoliative syndromeLOXL1 geneSingle-nucleotide polymorphism

Identifiers

PMID26758070
OpenAlexW2236577077

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.