Evidence map›Paper›PMID 26758068›Full record

ArticleNature communications2016

Structural basis of RNA recognition and dimerization by the STAR proteins T-STAR and Sam68.

Mikael Feracci, Jaelle N Foot, Sushma N Grellscheid, Marina Danilenko, Ralf Stehle, Oksana Gonchar, Hyun-Seo Kang, Caroline Dalgliesh, N Helge Meyer, Yilei Liu and 5 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
4.9field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 74 citations in OpenAlex.

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  13. Role of Sam68 as an adaptor protein in inflammatory signaling.Cellular and molecular life sciences : CMLS · 2024
    Review
  14. 2'-Frontiers in molecular biosciences · 2024
    Article
  15. Review
  16. Development of Bifunctional, Raman Active Diyne-Girder Stapled α-Helical Peptides.Chemistry (Weinheim an der Bergstrasse, Germany) · 2023
    Article
  17. Review
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 2 countries.

Mikael FeracciDepartment of Molecular and Cell Biology, University of Leicester, Henry Wellcome Building, Lancaster Road, Leicester LE1 9HN, UK.
Jaelle N FootDepartment of Molecular and Cell Biology, University of Leicester, Henry Wellcome Building, Lancaster Road, Leicester LE1 9HN, UK.
Sushma N GrellscheidInstitute of Genetic Medicine, Newcastle University, Central Parkway, Newcastle NE1 3BZ, UK.
Marina DanilenkoInstitute of Genetic Medicine, Newcastle University, Central Parkway, Newcastle NE1 3BZ, UK.
Ralf StehleCenter for Integrated Protein Science Munich at Biomolecular NMR Spectroscopy, Department Chemie, Technische Universität München, Lichtenbergstr. 4, DE-85747 Garching, Germany.
Oksana GoncharDepartment of Molecular and Cell Biology, University of Leicester, Henry Wellcome Building, Lancaster Road, Leicester LE1 9HN, UK.
Hyun-Seo KangCenter for Integrated Protein Science Munich at Biomolecular NMR Spectroscopy, Department Chemie, Technische Universität München, Lichtenbergstr. 4, DE-85747 Garching, Germany.
Caroline DalglieshInstitute of Genetic Medicine, Newcastle University, Central Parkway, Newcastle NE1 3BZ, UK.
N Helge MeyerCenter for Integrated Protein Science Munich at Biomolecular NMR Spectroscopy, Department Chemie, Technische Universität München, Lichtenbergstr. 4, DE-85747 Garching, Germany.
Yilei LiuInstitute of Genetic Medicine, Newcastle University, Central Parkway, Newcastle NE1 3BZ, UK.
Albert LahatSchool of Biological and Biomedical Sciences, University of Durham, South Road, Durham DH1 3LE, UK.
Michael SattlerCenter for Integrated Protein Science Munich at Biomolecular NMR Spectroscopy, Department Chemie, Technische Universität München, Lichtenbergstr. 4, DE-85747 Garching, Germany.
Ian C EperonDepartment of Molecular and Cell Biology, University of Leicester, Henry Wellcome Building, Lancaster Road, Leicester LE1 9HN, UK.
David J ElliottInstitute of Genetic Medicine, Newcastle University, Central Parkway, Newcastle NE1 3BZ, UK.
Cyril DominguezDepartment of Molecular and Cell Biology, University of Leicester, Henry Wellcome Building, Lancaster Road, Leicester LE1 9HN, UK.
Newcastle University · GBUniversity of Leicester · GBCenter for Integrated Protein Science Munich · DEDurham University · GBTechnical University of Munich · DE

Funding

Biotechnology and Biological Sciences Research Council BB/D013917/1Biotechnology and Biological Sciences Research Council BB/K018957/1Medical Research Council G1000526
6 · The paper itself

Abstract

Sam68 and T-STAR are members of the STAR family of proteins that directly link signal transduction with post-transcriptional gene regulation. Sam68 controls the alternative splicing of many oncogenic proteins. T-STAR is a tissue-specific paralogue that regulates the alternative splicing of neuronal pre-mRNAs. STAR proteins differ from most splicing factors, in that they contain a single RNA-binding domain. Their specificity of RNA recognition is thought to arise from their property to homodimerize, but how dimerization influences their function remains unknown. Here, we establish at atomic resolution how T-STAR and Sam68 bind to RNA, revealing an unexpected mode of dimerization different from other members of the STAR family. We further demonstrate that this unique dimerization interface is crucial for their biological activity in splicing regulation, and suggest that the increased RNA affinity through dimer formation is a crucial parameter enabling these proteins to select their functional targets within the transcriptome.

Indexed as

Alternative SplicingAdaptor Proteins, Signal TransducingAmino Acid SequenceAnimalsDimerizationDNA-Binding ProteinsHEK293 CellsHumansMaleMiceMolecular Sequence DataNucleotide MotifsProtein Structure, TertiaryRNARNA-Binding ProteinsStructure-Activity RelationshipAdaptor Proteins, Signal TransducingDNA-Binding ProteinsKHDRBS1 protein, humanKHDRBS3 protein, humanRNARNA-Binding Proteins

Identifiers

PMID26758068
PMCPMC4735526
OpenAlexW2238519431

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.