Evidence map›Paper›PMID 26758018›Full record

ArticleMicrobial cell factories2016

Using global transcription machinery engineering (gTME) to improve ethanol tolerance of Zymomonas mobilis.

Furong Tan, Bo Wu, Lichun Dai, Han Qin, Zongxia Shui, Jingli Wang, Qili Zhu, Guoquan Hu, Mingxiong He

Abstract read
In one paragraph

Article in Microbial cell factories, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed.

  1. Engineering ethanologenic bacteriumSynthetic and systems biotechnology · 2026
    Article
  2. Article
  3. The role of AdhE mutations inJournal of bacteriology · 2025
    Article
  4. Review
  5. Review
  6. Article
  7. Review
  8. Review
  9. Mediator Engineering ofApplied and environmental microbiology · 2022
    Article
  10. Article
  11. Molecular mechanism of enhanced ethanol tolerance associated withFrontiers in bioengineering and biotechnology · 2022
    Article
  12. Review
  13. Article
  14. Review
  15. Article
  16. Review
  17. Physiological effects of overexpressed sigma factors on fermentative stress response of Zymomonas mobilis.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2020
    Article
  18. Article
  19. Phenotypic and genomic analysis ofBiotechnology reports (Amsterdam, Netherlands) · 2019
    Article
  20. Synthetic evolution.Nature biotechnology · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Furong TanBiogas Institute of Ministry of Agriculture, Biomass Energy Technology Research Centre, Section 4-13, Renmin Nanlu, Chengdu, 610041, China. furong987@126.com.
Bo WuBiogas Institute of Ministry of Agriculture, Biomass Energy Technology Research Centre, Section 4-13, Renmin Nanlu, Chengdu, 610041, China. wubo@caas.cn.
Lichun DaiBiogas Institute of Ministry of Agriculture, Biomass Energy Technology Research Centre, Section 4-13, Renmin Nanlu, Chengdu, 610041, China. dailichun@caas.cn.
Han QinBiogas Institute of Ministry of Agriculture, Biomass Energy Technology Research Centre, Section 4-13, Renmin Nanlu, Chengdu, 610041, China. hanching692@gmail.com.
Zongxia ShuiBiogas Institute of Ministry of Agriculture, Biomass Energy Technology Research Centre, Section 4-13, Renmin Nanlu, Chengdu, 610041, China. shuizong1127@126.com.
Jingli WangBiogas Institute of Ministry of Agriculture, Biomass Energy Technology Research Centre, Section 4-13, Renmin Nanlu, Chengdu, 610041, China. changlan323@163.com.
Qili ZhuBiogas Institute of Ministry of Agriculture, Biomass Energy Technology Research Centre, Section 4-13, Renmin Nanlu, Chengdu, 610041, China. zhuqili121@163.com.
Guoquan HuBiogas Institute of Ministry of Agriculture, Biomass Energy Technology Research Centre, Section 4-13, Renmin Nanlu, Chengdu, 610041, China. huguoquan1@hotmail.com.
Mingxiong HeBiogas Institute of Ministry of Agriculture, Biomass Energy Technology Research Centre, Section 4-13, Renmin Nanlu, Chengdu, 610041, China. hemingxiong@caas.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundWith the increasing global crude oil crisis and resulting environmental concerns, the production of biofuels from renewable resources has become increasingly important. One of the major challenges faced during the process of biofuel production is the low tolerance of the microbial host towards increasing biofuel concentrations.

resultsHere, we demonstrate that the ethanol tolerance of Zymomonas mobilis can be greatly enhanced through the random mutagenesis of global transcription factor RpoD protein, (σ(70)). Using an enrichment screening, four mutants with elevated ethanol tolerance were isolated from error-prone PCR libraries. All mutants showed significant growth improvement in the presence of ethanol stress when compared to the control strain. After an ethanol (9 %) stress exposure lasting 22 h, the rate of glucose consumption was approximately 1.77, 1.78 and 1.39 g L(-1) h(-1) in the best ethanol-tolerant strain ZM4-mrpoD4, its rebuilt mutant strain ZM4-imrpoD and the control strain, respectively. Our results indicated that both ZM4-mrpoD4 and ZM4-imrpoD consumed glucose at a faster rate after the initial 9 % (v/v) ethanol stress, as nearly 0.64 % of the initial glucose remained after 54 h incubation versus approximately 5.43 % for the control strain. At 9 % ethanol stress, the net ethanol productions by ZM4-mrpoD4 and ZM4-imrpoD during the 30-54 h were 13.0-14.1 g/l versus only 6.6-7.7 g/l for the control strain. The pyruvate decarboxylase activity of ZM4-mrpoD4 was 62.23 and 68.42 U/g at 24 and 48 h, respectively, which were 2.6 and 1.6 times higher than the control strain. After 24 and 48 h of 9 % ethanol stress, the alcohol dehydrogenase activities of ZM4-mrpoD4 were also augmented, showing an approximate 1.4 and 1.3 times increase, respectively, when compared to the control strain. Subsequent quantitative real-time PCR analysis under these stress conditions revealed that the relative expression of pdc in cultured (6 and 24 h) ZM4-mrpoD4 increased by 9.0- and 12.7-fold when compared to control strain.

conclusionsCollectively, these results demonstrate that the RpoD mutation can enhance ethanol tolerance in Z. mobilis. Our results also suggested that RpoD may play an important role in resisting high ethanol concentration in Z. mobilis and manipulating RpoD via global transcription machinery engineering (gTME) can provide an alternative and useful approach for strain improvement for complex phenotypes.

Indexed as

Bacterial ProteinsEthanolFermentationMutationZymomonasBacterial ProteinsEthanol

Identifiers

PMID26758018
PMCPMC4711062

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.