Evidence map›Paper›PMID 26756967›Full record

ArticleJournal of molecular biology2016

Functionalization of an Antisense Small RNA.

Guillermo Rodrigo, Satya Prakash, Teresa Cordero, Manish Kushwaha, Alfonso Jaramillo

Open access · hybridAbstract read
In one paragraph

Article in Journal of molecular biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.5field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Review
  3. WISB: Warwick Integrative Synthetic Biology Centre.Biochemical Society transactions · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 3 countries.

Guillermo RodrigoInstituto de Biología Molecular y Celular de Plantas, Consejo Superior de Investigaciones Científicas, Universidad Politécnica de Valencia, 46022 Valencia, Spain.
Satya PrakashSchool of Life Sciences, University of Warwick, Coventry CV4 7AL, United Kingdom.
Teresa CorderoInstituto de Biología Molecular y Celular de Plantas, Consejo Superior de Investigaciones Científicas, Universidad Politécnica de Valencia, 46022 Valencia, Spain.
Manish KushwahaSchool of Life Sciences, University of Warwick, Coventry CV4 7AL, United Kingdom.
Alfonso JaramilloSchool of Life Sciences, University of Warwick, Coventry CV4 7AL, United Kingdom; Institute of Systems and Synthetic Biology, Centre National de la Recherche Scientifique, Université d'Evry val d'Essonne, 91000 Évry, France. Electronic address: Alfonso.Jaramillo@warwick.ac.uk.
University of Warwick · GBConsejo Superior de Investigaciones Científicas · ES

Funding

Biotechnology and Biological Sciences Research Council BB/M017982/1
6 · The paper itself

Abstract

In order to explore the possibility of adding new functions to preexisting genes, we considered a framework of riboregulation. We created a new riboregulator consisting of the reverse complement of a known riboregulator. Using computational design, we engineered a cis-repressing 5' untranslated region that can be activated by this new riboregulator. As a result, both RNAs can orthogonally trans-activate translation of their cognate, independent targets. The two riboregulators can also repress each other by antisense interaction, although not symmetrically. Our work highlights that antisense small RNAs can work as regulatory agents beyond the antisense paradigm and that, hence, they could be interfaced with other circuits used in synthetic biology.

Indexed as

Gene Expression Regulation, BacterialCell EngineeringEscherichia coliGenetic EngineeringRNA, AntisenseRNA, Small UntranslatedSynthetic BiologyRNA, AntisenseRNA, Small Untranslatedbiotechnologycomputational designinformation encodingregulatory RNAsynthetic biology

Identifiers

PMID26756967
PMCPMC4819895
OpenAlexW2223968436

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.