Evidence map›Paper›PMID 26755772›Full record

ArticleThe Journal of general physiology2016

Transition metal ion FRET to measure short-range distances at the intracellular surface of the plasma membrane.

Sharona E Gordon, Eric N Senning, Teresa K Aman, William N Zagotta

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of general physiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 44 citations in OpenAlex.

  1. Article
  2. Article
  3. Photoswitching alters fluorescence readout of jGCaMP8 CaProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
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  5. Review
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  13. The Dark Matter of Biology.Biophysical journal · 2016
    Review
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Sharona E GordonDepartment of Physiology and Biophysics, University of Washington, Seattle, WA 98195 seg@uw.edu zagotta@uw.edu.
Eric N SenningDepartment of Physiology and Biophysics, University of Washington, Seattle, WA 98195.
Teresa K AmanDepartment of Physiology and Biophysics, University of Washington, Seattle, WA 98195.
William N ZagottaDepartment of Physiology and Biophysics, University of Washington, Seattle, WA 98195 seg@uw.edu zagotta@uw.edu.
University of Washington · US

Funding

Vector and Transgenic Mouse CoreP30DK017047 · NIDDK · UNIVERSITY OF WASHINGTON · PI REBECCA LUCY HULL-MEICHLE · 1986 to 2026
$41.4M
Vision Research CoreP30EY001730 · NEI · UNIVERSITY OF WASHINGTON · PI JAMES Bryant HURLEY · 1985 to 2026
$23.5M
EXPERIMENTAL PATHOLOGY OF CARDIOVASCULAR DISEASET32HL007312 · NHLBI · UNIVERSITY OF WASHINGTON · PI MAJESKY, MARK W., SCHWARTZ, STEPHEN MARK · 1985 to 2019
$11.8M
GATING MECHANISMS OF RETINAL ROD CGMP-ACTIVATED CHANNELSR01EY010329 · NEI · UNIVERSITY OF WASHINGTON · PI ZAGOTTA, WILLIAM N · 1994 to 2023
$7.7M
Inflammatory hyperalgesia mediated by TRPV1, the pepper spray receptor in the corR01EY017564 · NEI · UNIVERSITY OF WASHINGTON · PI GORDON, SHARONA E · 2006 to 2022
$6.5M
Regulation of KCNH ion channelsR01MH102378 · NIMH · UNIVERSITY OF WASHINGTON · PI ZAGOTTA, WILLIAM N · 2014 to 2018
$1.9M
Supplement to Multimodal Gating Mechanisms of TRPV1 Ion ChannelsR01GM125351 · NIGMS · UNIVERSITY OF WASHINGTON · PI GORDON, SHARONA E · 2018 to 2021
$1.8M
Mechanisms of TRPV1 Channel RegulationR01GM100718 · NIGMS · UNIVERSITY OF WASHINGTON · PI GORDON, SHARONA E, ZAGOTTA, WILLIAM N · 2012 to 2015
$1.5M
Electrophysiology-Optical Workstation for Ion Channel BiophysicsS10RR025429 · NCRR · UNIVERSITY OF WASHINGTON · PI GORDON, SHARONA E · 2009 to 2009
$499k
Protein kinase A modulation of NMDA receptor gating and permeabilityF32NS077622 · NINDS · UNIVERSITY OF WASHINGTON · PI AMAN, TERESA K · 2012 to 2014
$156k
NCRR NIH HHS S10 RR025429NCRR NIH HHS S10RR025429NEI NIH HHS P30 EY001730NEI NIH HHS P30EY001730NEI NIH HHS R01 EY010329NEI NIH HHS R01EY010329NEI NIH HHS R01 EY017564NEI NIH HHS R01EY017564NHLBI NIH HHS T32 HL007312NHLBI NIH HHS T32HL007312NIDDK NIH HHS P30 DK017047NIDDK NIH HHS P30DK017047NIGMS NIH HHS R01 GM100718NIGMS NIH HHS R01GM100718NIGMS NIH HHS R01 GM125351NIMH NIH HHS R01 MH102378NIMH NIH HHS R01MH102378NINDS NIH HHS F32 NS077622NINDS NIH HHS F32NS077622
6 · The paper itself

Abstract

Biological membranes are complex assemblies of lipids and proteins that serve as platforms for cell signaling. We have developed a novel method for measuring the structure and dynamics of the membrane based on fluorescence resonance energy transfer (FRET). The method marries four technologies: (1) unroofing cells to isolate and access the cytoplasmic leaflet of the plasma membrane; (2) patch-clamp fluorometry (PCF) to measure currents and fluorescence simultaneously from a membrane patch; (3) a synthetic lipid with a metal-chelating head group to decorate the membrane with metal-binding sites; and (4) transition metal ion FRET (tmFRET) to measure short distances between a fluorescent probe and a transition metal ion on the membrane. We applied this method to measure the density and affinity of native and introduced metal-binding sites in the membrane. These experiments pave the way for measuring structural rearrangements of membrane proteins relative to the membrane.

Indexed as

AnimalsBinding SitesCell LineCell MembraneCytoplasmFluorescence Resonance Energy TransferFluorescent DyesHEK293 CellsHumansMembrane ProteinsMetalsProtein BindingRatsFluorescent DyesMembrane ProteinsMetals

Identifiers

PMID26755772
PMCPMC4727948
OpenAlexW2288131330

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.