Evidence map›Paper›PMID 26755630›Full record

ArticleJournal of bacteriology2016

Succinic Semialdehyde Promotes Prosurvival Capability of Agrobacterium tumefaciens.

Chao Wang, Desong Tang, Yong-Gui Gao, Lian-Hui Zhang

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
2.1field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

  1. Changes in the Histology of Walnut (International journal of molecular sciences · 2023
    Article
  2. The versatile GABA in plants.Plant signaling & behavior · 2021
    Review
  3. Structural basis of a novel repressor, SghR, controllingThe Journal of biological chemistry · 2020
    Article
  4. Agrobacteria reprogram virulence gene expression by controlled release of host-conjugated signals.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

Chao WangInstitute of Molecular and Cell Biology, Singapore, Singapore National Cancer Centre Singapore, Singapore, Singapore.
Desong TangSchool of Biological Sciences, Nanyang Technological University, Singapore, Singapore.
Yong-Gui GaoInstitute of Molecular and Cell Biology, Singapore, Singapore School of Biological Sciences, Nanyang Technological University, Singapore, Singapore.
Lian-Hui ZhangInstitute of Molecular and Cell Biology, Singapore, Singapore Guangdong Province Key Laboratory of Microbial Signals and Disease Control, South China Agricultural University, Guangzhou, China lianhui@imcb.a-star.edu.sg.
Nanyang Technological University · SGInstitute of Molecular and Cell Biology · SGNational Cancer Centre Singapore · SG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

unlabelledSuccinic semialdehyde (SSA), an important metabolite of γ-aminobutyric acid (GABA), is a ligand of the repressor AttJ regulating the expression of the attJ-attKLM gene cluster in the plant pathogen Agrobacterium tumefaciens. While the response of A. tumefaciens to GABA and the function of attKLM have been extensively studied, genetic and physiological responses of A. tumefaciens to SSA remain unknown. In combination with microarray and genetic approaches, this study sets out to explore new roles of the SSA-AttJKLM regulatory mechanism during bacterial infection. The results showed that SSA plays a key role in regulation of several bacterial activities, including C4-dicarboxylate utilization, nitrate assimilation, and resistance to oxidative stress. Interestingly, while the SSA relies heavily on the functional AttKLM in mediating nitrate assimilation and oxidative stress resistance, the compound could regulate utilization of C4-dicarboxylates independent of AttJKLM. We further provide evidence that SSA controls C4-dicarboxylate utilization through induction of an SSA importer and that disruption of attKLM attenuates the tumorigenicity of A. tumefaciens. Taken together, these findings indicate that SSA could be a potent plant signal which, together with AttKLM, plays a vital role in promoting the bacterial prosurvival abilities during infection. IMPORTANCE: Agrobacterium tumefaciens is a plant pathogen causing crown gall diseases and has been well known as a powerful tool for plant genetic engineering. During the long history of microbe-host interaction, A. tumefaciens has evolved the capabilities of recognition and response to plant-derived chemical metabolites. Succinic semialdehyde (SSA) is one such metabolite. Previous results have demonstrated that SSA functions to activate a quorum-quenching mechanism and thus to decrease the level of quorum-sensing signals, thereby avoiding the elicitation of a plant defense. Here, we studied the effect of SSA on gene expression at a genome-wide level and reported that SSA also promotes bacterial survival during infection. These findings provide a new insight on the biological significance of chemical signaling between agrobacteria and plant hosts.

Indexed as

Agrobacterium tumefaciensBacterial Proteinsgamma-Aminobutyric AcidGene Expression ProfilingGene Expression Regulation, BacterialMetabolic Networks and PathwaysMicroarray AnalysisMicrobial ViabilityNitratesOperonOxidative StressBacterial Proteinsgamma-Aminobutyric AcidNitratessuccinic semialdehyde

Identifiers

PMID26755630
PMCPMC4772594
OpenAlexW2233014163

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.