Evidence map›Paper›PMID 26755329›Full record

ArticleHepatology (Baltimore, Md.)2016

Physiological ranges of matrix rigidity modulate primary mouse hepatocyte function in part through hepatocyte nuclear factor 4 alpha.

Seema S Desai, Jason C Tung, Vivian X Zhou, James P Grenert, Yann Malato, Milad Rezvani, Regina Español-Suñer, Holger Willenbring, Valerie M Weaver, Tammy T Chang

Open access · greenAbstract read
In one paragraph

Article in Hepatology (Baltimore, Md.), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 91 papers.

0numbers the graph read from it
0cells of the map it votes in
91citing papers in PubMed
8.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

91 citing papers in PubMed, 183 citations in OpenAlex.

  1. Article
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  11. Liver Fibrosis: Interactions Between Cells and Microenvironments.The Turkish journal of gastroenterology : the official journal of Turkish Society of Gastroenterology · 2025
    Review
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  15. Article
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31 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Seema S DesaiDepartment of Surgery, University of California, San Francisco, San Francisco, CA.
Jason C TungDepartment of Surgery, University of California, San Francisco, San Francisco, CA.
Vivian X ZhouDepartment of Surgery, University of California, San Francisco, San Francisco, CA.
James P GrenertDepartment of Pathology, University of California, San Francisco, San Francisco, CA.
Yann MalatoDepartment of Surgery, University of California, San Francisco, San Francisco, CA.
Milad RezvaniEli and Edythe Broad Center of Regeneration Medicine and Stem Cell Research, University of California, San Francisco, San Francisco, CA.
Regina Español-SuñerEli and Edythe Broad Center of Regeneration Medicine and Stem Cell Research, University of California, San Francisco, San Francisco, CA.
Holger WillenbringDepartment of Surgery, University of California, San Francisco, San Francisco, CA.
Valerie M WeaverDepartment of Surgery, University of California, San Francisco, San Francisco, CA.
Tammy T ChangDepartment of Surgery, University of California, San Francisco, San Francisco, CA.
University of California, San Francisco · USBroad Center · US

Funding

UCSF Liver Core CenterP30DK026743 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Jennifer Y. Chen · 1986 to 2026
$30.7M
Training in Developmental Cardiovascular BiologyT32HL007544 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI SRIVASTAVA, DEEPAK · 1985 to 2021
$4.5M
Liver Tissue Engineering Through Three-Dimensional Hepatocyte CultureK08DK093708 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI CHANG, TAMMY T · 2012 to 2016
$760k
NHLBI NIH HHS T32 HL007544NIDDK NIH HHS K08 DK093708NIDDK NIH HHS P30 DK026743
6 · The paper itself

Abstract

unlabelledMatrix rigidity has important effects on cell behavior and is increased during liver fibrosis; however, its effect on primary hepatocyte function is unknown. We hypothesized that increased matrix rigidity in fibrotic livers would activate mechanotransduction in hepatocytes and lead to inhibition of liver-specific functions. To determine the physiologically relevant ranges of matrix stiffness at the cellular level, we performed detailed atomic force microscopy analysis across liver lobules from normal and fibrotic livers. We determined that normal liver matrix stiffness was around 150 Pa and increased to 1-6 kPa in areas near fibrillar collagen deposition in fibrotic livers. In vitro culture of primary hepatocytes on collagen matrix of tunable rigidity demonstrated that fibrotic levels of matrix stiffness had profound effects on cytoskeletal tension and significantly inhibited hepatocyte-specific functions. Normal liver stiffness maintained functional gene regulation by hepatocyte nuclear factor 4 alpha (HNF4α), whereas fibrotic matrix stiffness inhibited the HNF4α transcriptional network. Fibrotic levels of matrix stiffness activated mechanotransduction in primary hepatocytes through focal adhesion kinase. In addition, blockade of the Rho/Rho-associated protein kinase pathway rescued HNF4α expression from hepatocytes cultured on stiff matrix.

conclusionFibrotic levels of matrix stiffness significantly inhibit hepatocyte-specific functions in part by inhibiting the HNF4α transcriptional network mediated through the Rho/Rho-associated protein kinase pathway. Increased appreciation of the role of matrix rigidity in modulating hepatocyte function will advance our understanding of the mechanisms of hepatocyte dysfunction in liver cirrhosis and spur development of novel treatments for chronic liver disease. (Hepatology 2016;64:261-275).

Indexed as

AnimalsCells, CulturedCytoskeletonExtracellular MatrixGene ExpressionHepatocyte Nuclear Factor 4HepatocytesLiver CirrhosisMechanotransduction, CellularMice, Inbred C57BLMicroscopy, Atomic Forcerho-Associated KinasesHepatocyte Nuclear Factor 4Hnf4a protein, mouserho-Associated Kinases

Identifiers

PMID26755329
PMCPMC5224931
OpenAlexW2241161952

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.