ArticlePlant physiology2016
The Dynamics of Transcript Abundance during Cellularization of Developing Barley Endosperm.
Article in Plant physiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
19 citing papers in PubMed, 37 citations in OpenAlex.
- Eight weeks after anthesis: a critical fruit developmental stage for tissue-border establishment in oil palm tenera fruit.Protoplasma · 2026Article
- Dormancy Versus Germination: 3D Protein Modeling and Evolutionary Analyses Define the Roles of Genetic Variants in the Barley MKK3 Enzyme.International journal of molecular sciences · 2026Article
- Transcriptomic analysis of developing sorghum grains to detect genes related to cell wall biosynthesis and remodelling.BMC genomic data · 2024Article
- Cytokinin Translocation to, and Biosynthesis and Metabolism within, Cereal and Legume Seeds: Looking Back to Inform the Future.Metabolites · 2023Review
- Dissection of Developmental Programs and Regulatory Modules Directing Endosperm Transfer Cell and Aleurone Identity in the Syncytial Endosperm of Barley.Plants (Basel, Switzerland) · 2023Article
- Transcriptome Analysis Reveals Potential Mechanism in Storage Protein Trafficking within Developing Grains of Common Wheat.International journal of molecular sciences · 2022Article
- Identification of candidate MYB transcription factors that influenceFrontiers in plant science · 2022Article
- Genes That Mediate Starch Metabolism in Developing and Germinated Barley Grain.Frontiers in plant science · 2021Article
- Genome Wide Analysis of the Transcriptional Profiles in Different Regions of the Developing Rice Grains.Rice (New York, N.Y.) · 2020Article
- Heritable temporal gene expression patterns correlate with metabolomic seed content in developing hexaploid oat seed.Plant biotechnology journal · 2020Article
- Cytokinin dehydrogenase: a genetic target for yield improvement in wheat.Plant biotechnology journal · 2020Review
- Protein sorting into protein bodies during barley endosperm development is putatively regulated by cytoskeleton members, MVBs and the HvSNF7s.Scientific reports · 2020Article
- Co-evolution of Enzymes Involved in Plant Cell Wall Metabolism in the Grasses.Frontiers in plant science · 2019Review
- Evolution of the Cell Wall Gene Families of Grasses.Frontiers in plant science · 2019Article
- Differences in hydrolytic enzyme activity accompany natural variation in mature aleurone morphology in barley (Hordeum vulgare L.).Scientific reports · 2018Article
- Genome-wide identification, classification, and expression of phytocyanins in Populus trichocarpa.Planta · 2018Article
- A group of nuclear factor Y transcription factors are sub-functionalized during endosperm development in monocots.Journal of experimental botany · 2018Article
- Modification of Barley Plant Productivity Through Regulation of Cytokinin Content by Reverse-Genetics Approaches.Frontiers in plant science · 2018Article
- Metagenomics Investigation of Agarlytic Genes and Genomes in Mangrove Sediments in China: A Potential Repertory for Carbohydrate-Active Enzymes.Frontiers in microbiology · 2018Article
Corrections and comments
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Authors and funding
11 authors at 1 institution in 2 countries.
Funding
Abstract
Within the cereal grain, the endosperm and its nutrient reserves are critical for successful germination and in the context of grain utilization. The identification of molecular determinants of early endosperm development, particularly regulators of cell division and cell wall deposition, would help predict end-use properties such as yield, quality, and nutritional value. Custom microarray data have been generated using RNA isolated from developing barley grain endosperm 3 d to 8 d after pollination (DAP). Comparisons of transcript abundance over time revealed 47 gene expression modules that can be clustered into 10 broad groups. Superimposing these modules upon cytological data allowed patterns of transcript abundance to be linked with key stages of early grain development. Here, attention was focused on how the datasets could be mined to explore and define the processes of cell wall biosynthesis, remodeling, and degradation. Using a combination of spatial molecular network and gene ontology enrichment analyses, it is shown that genes involved in cell wall metabolism are found in multiple modules, but cluster into two main groups that exhibit peak expression at 3 DAP to 4 DAP and 5 DAP to 8 DAP. The presence of transcription factor genes in these modules allowed candidate genes for the control of wall metabolism during early barley grain development to be identified. The data are publicly available through a dedicated web interface (https://ics.hutton.ac.uk/barseed/), where they can be used to interrogate co- and differential expression for any other genes, groups of genes, or transcription factors expressed during early endosperm development.
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Registered trials
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