Evidence map›Paper›PMID 26754419›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2016

Isolation and fine mapping of Rps6: an intermediate host resistance gene in barley to wheat stripe rust.

Andrew M Dawson, John N Ferguson, Matthew Gardiner, Phon Green, Amelia Hubbard, Matthew J Moscou

Erratum issuedOpen access · hybridAbstract read
In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
17.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 41 citations in OpenAlex.

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  7. Advances in Understanding Defense Mechanisms inFrontiers in plant science · 2021
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  11. Transgressive segregation reveals mechanisms ofProceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  12. Pyramiding of nine transgenes in maize generates high-level resistance against necrotrophic maize pathogens.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2018
    Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Fine mapping of the chromosome 5B region carrying closely linked rust resistance genes Yr47 and Lr52 in wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2017
    Article
  18. Article
  19. Fine mapping of barley locus Rps6 conferring resistance to wheat stripe rust.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2016
    Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Andrew M DawsonThe Sainsbury Laboratory, Norwich Research Park, Norwich, NR4 7UH, UK.
John N FergusonThe Sainsbury Laboratory, Norwich Research Park, Norwich, NR4 7UH, UK.
Matthew GardinerThe Sainsbury Laboratory, Norwich Research Park, Norwich, NR4 7UH, UK.
Phon GreenThe Sainsbury Laboratory, Norwich Research Park, Norwich, NR4 7UH, UK.
Amelia HubbardNational Institute of Agricultural Botany, Huntingdon Road, Cambridge, CB3 0LE, UK.
Matthew J MoscouThe Sainsbury Laboratory, Norwich Research Park, Norwich, NR4 7UH, UK. matthew.moscou@sainsbury-laboratory.ac.uk.
Sainsbury Laboratory · GBNorwich Research Park · GBNational Institute of Agricultural Botany · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

key messageWe uncouple host and nonhost resistance in barley to Puccinia striiformis ff. spp. hordei and tritici . We isolate, fine map, and physically anchor Rps6 to chromosome 7H in barley. A plant may be considered a nonhost of a pathogen if all known genotypes of a plant species are resistant to all known isolates of a pathogen species. However, if a small number of genotypes are susceptible to some known isolates of a pathogen species this plant may be considered an intermediate host. Barley (Hordeum vulgare) is an intermediate host for Puccinia striiformis f. sp. tritici (Pst), the causal agent of wheat stripe rust. We wanted to understand the genetic architecture underlying resistance to Pst and to determine whether any overlap exists with resistance to the host pathogen, Puccinia striiformis f. sp. hordei (Psh). We mapped Pst resistance to chromosome 7H and show that host and intermediate host resistance is genetically uncoupled. Therefore, we designate this resistance locus Rps6. We used phenotypic and genotypic selection on F2:3 families to isolate Rps6 and fine mapped the locus to a 0.1 cM region. Anchoring of the Rps6 locus to the barley physical map placed the region on a single fingerprinted contig spanning a physical region of 267 kb. Efforts are now underway to sequence the minimal tiling path and to delimit the physical region harboring Rps6. This will facilitate additional marker development and permit identification of candidate genes in the region.

Indexed as

Genes, PlantAnalysis of VarianceBasidiomycotaChromosome MappingDisease ResistanceDNA, PlantGenetic MarkersHordeumPhenotypePlant DiseasesQuantitative Trait LociSequence Analysis, DNATranscriptomeDNA, PlantGenetic Markers

Identifiers

PMID26754419
PMCPMC4799244
OpenAlexW2237975089

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.