Evidence map›Paper›PMID 26754154›Full record

ArticleVeterinary research2016

Characterization of two Austrian porcine reproductive and respiratory syndrome virus (PRRSV) field isolates reveals relationship to East Asian strains.

Leonie J Sinn, Leonie Zieglowski, Hanna Koinig, Benjamin Lamp, Bettina Jansko, Georg Mößlacher, Christiane Riedel, Isabel Hennig-Pauka, Till Rümenapf

Open access · goldAbstract read
In one paragraph

Article in Veterinary research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
3.9field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Leonie J SinnInstitute of Virology, Department for Pathobiology, University of Veterinary Medicine Vienna, Veterinärplatz 1, 1210, Vienna, Austria. leonie.sinn@vetmeduni.ac.at.
Leonie ZieglowskiInstitute of Virology, Department for Pathobiology, University of Veterinary Medicine Vienna, Veterinärplatz 1, 1210, Vienna, Austria. leonie.zieglowski@gmx.de.
Hanna KoinigClinic for Swine, Department for Farm Animals and Veterinary Public Health, University of Veterinary Medicine Vienna, Veterinärplatz 1, 1210, Vienna, Austria. hanna.koinig@vetmeduni.ac.at.
Benjamin LampInstitute of Virology, Department for Pathobiology, University of Veterinary Medicine Vienna, Veterinärplatz 1, 1210, Vienna, Austria. benjamin.lamp@vetmeduni.ac.at.
Bettina JanskoAnimal Health Service Upper Austria, Molkereistraße 5, 4910, Ried im Innkreis, Austria. bettinajanr@gmail.com.
Georg MößlacherAnimal Health Service Upper Austria, Molkereistraße 5, 4910, Ried im Innkreis, Austria. mossl@gmx.net.
Christiane RiedelInstitute of Virology, Department for Pathobiology, University of Veterinary Medicine Vienna, Veterinärplatz 1, 1210, Vienna, Austria. christiane.riedel@vetmeduni.ac.at.
Isabel Hennig-PaukaClinic for Swine, Department for Farm Animals and Veterinary Public Health, University of Veterinary Medicine Vienna, Veterinärplatz 1, 1210, Vienna, Austria. isabel.hennig-pauka@vetmeduni.ac.at.
Till RümenapfInstitute of Virology, Department for Pathobiology, University of Veterinary Medicine Vienna, Veterinärplatz 1, 1210, Vienna, Austria. till.ruemenapf@vetmeduni.ac.at.
University of Veterinary Medicine Vienna · ATFACC (Austria) · AT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Porcine reproductive and respiratory syndrome virus (PRRSV) causes major problems for the swine industry worldwide. Due to Austria's central location in Europe, a large number of animals are transported through the country. However, little is known about current PRRSV strains and epidemiology. We determined full-length genome sequences of two Austrian field isolates (AUT13-883 and AUT14-440) from recent PRRSV outbreaks and of a related German isolate (GER09-613). Phylogenetic analysis revealed that the strains belong to European genotype 1 subtype 1 and form a cluster together with a South Korean strain. Remarkably, AUT14-440 infected the simian cell line MARC-145 without prior adaptation. In addition, this isolate showed exceptional deletions in nonstructural protein 2, in the overlapping region of glycoprotein 3 and 4 and in the 3' untranslated region. Both Austrian isolates caused similar lung lesions but only pigs infected with AUT14-440 developed clear clinical signs of infection. Taken together, the genetic and biological characterization of two novel Austrian PRRSV field isolates revealed similarities to East Asian strains. This stresses the necessity for a more detailed analysis of current PRRSV strains in Europe beyond the determination of short ORF5 and ORF7 sequences.

Indexed as

Amino Acid SequenceAnimalsAsia, EasternAustriaCells, CulturedDisease OutbreaksFemaleGene Expression Regulation, ViralMacrophages, AlveolarMaleMolecular Sequence DataPhylogenyPorcine Reproductive and Respiratory SyndromePorcine respiratory and reproductive syndrome virusSwineViral ProteinsViral Proteins

Identifiers

PMID26754154
PMCPMC4709888
OpenAlexW2234703215

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.