Evidence map›Paper›PMID 26752526›Full record

ArticlePloS one2016

De Novo Transcriptome and Expression Profile Analysis to Reveal Genes and Pathways Potentially Involved in Cantharidin Biosynthesis in the Blister Beetle Mylabris cichorii.

Yi Huang, Zhongkang Wang, Shenfang Zha, Yu Wang, Wei Jiang, Yufeng Liao, Zhangyong Song, Zhaoran Qi, Youping Yin

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.1field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
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  4. Review
  5. Article
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  7. Review
  8. Article
  9. Article
  10. Review
  11. Draft Genome of a Blister BeetleFrontiers in genetics · 2019
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Yi HuangKey Laboratory of Genetic Function and Regulation, School of Life Science, Chongqing University, Chongqing 400030, China.
Zhongkang WangKey Laboratory of Genetic Function and Regulation, School of Life Science, Chongqing University, Chongqing 400030, China.
Shenfang ZhaKey Laboratory of Genetic Function and Regulation, School of Life Science, Chongqing University, Chongqing 400030, China.
Yu WangKey Laboratory of Genetic Function and Regulation, School of Life Science, Chongqing University, Chongqing 400030, China.
Wei JiangKey Laboratory of Genetic Function and Regulation, School of Life Science, Chongqing University, Chongqing 400030, China.
Yufeng LiaoClinical Medicine college of Tianjin Medical University, Tianjin 300270, China.
Zhangyong SongKey Laboratory of Genetic Function and Regulation, School of Life Science, Chongqing University, Chongqing 400030, China.
Zhaoran QiKey Laboratory of Genetic Function and Regulation, School of Life Science, Chongqing University, Chongqing 400030, China.
Youping YinKey Laboratory of Genetic Function and Regulation, School of Life Science, Chongqing University, Chongqing 400030, China.
Chongqing University · CNTianjin Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The dried body of Mylabris cichorii is well-known Chinese traditional medicine. The sesquiterpenoid cantharidin, which is secreted mostly by adult male beetles, has recently been used as an anti-cancer drug. However, little is known about the mechanisms of cantharidin biosynthesis. Furthermore, there is currently no genomic or transcriptomic information for M. cichorii. In this study, we performed de novo assembly transcriptome of M. cichorii using the Illumina Hiseq2000. A single run produced 9.19 Gb of clean nucleotides comprising 29,247 sequences, including 23,739 annotated sequences (about 81%). We also constructed two expression profile libraries (20-25 day-old adult males and 20-25 day-old adult females) and discovered 2,465 significantly differentially-expressed genes. Putative genes and pathways involved in the biosynthesis of cantharidin were then characterized. We also found that cantharidin biosynthesis in M. cichorii might only occur via the mevalonate (MVA) pathway, not via the methylerythritol 4-phosphate/deoxyxylulose 5-phosphate (MEP/DOXP) pathway or a mixture of these. Besides, we considered that cantharidin biosynthesis might be related to the juvenile hormone (JH) biosynthesis or degradation. The results of transcriptome and expression profiling analysis provide a comprehensive sequence resource for M. cichorii that could facilitate the in-depth study of candidate genes and pathways involved in cantharidin biosynthesis, and may thus help to improve our understanding of the mechanisms of cantharidin biosynthesis in blister beetles.

Indexed as

TranscriptomeAnimalsCantharidinColeopteraDNA, ComplementaryErythritolFemaleGene Expression ProfilingGene LibraryGenome, InsectHigh-Throughput Nucleotide SequencingJuvenile HormonesMaleMedicine, Chinese TraditionalMevalonic AcidSequence Analysis, DNA2-methyl-D-erythritol-4-phosphateCantharidindeoxyxylulose phosphateDNA, ComplementaryErythritolJuvenile HormonesMevalonic AcidXylose

Identifiers

PMID26752526
PMCPMC4709229
OpenAlexW2240095357

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.