Evidence map›Paper›PMID 26751644›Full record

ArticleNature structural & molecular biology2016

Neil DNA glycosylases promote substrate turnover by Tdg during DNA demethylation.

Lars Schomacher, Dandan Han, Michael U Musheev, Khelifa Arab, Sabine Kienhöfer, Annika von Seggern, Christof Niehrs

Open access · greenAbstract read
In one paragraph

Article in Nature structural & molecular biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 57 papers.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed
6.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

57 citing papers in PubMed, 90 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Review
  6. Review
  7. Research progress on the role of the NEIL family in cancer.Frontiers in cell and developmental biology · 2025
    Review
  8. Article
  9. Review
  10. Review
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Lars Schomacher *Institute of Molecular Biology (IMB), Mainz, Germany.
Dandan Han *Institute of Molecular Biology (IMB), Mainz, Germany.
Michael U Musheev *Institute of Molecular Biology (IMB), Mainz, Germany.
Khelifa ArabInstitute of Molecular Biology (IMB), Mainz, Germany.
Sabine KienhöferInstitute of Molecular Biology (IMB), Mainz, Germany.
Annika von SeggernInstitute of Molecular Biology (IMB), Mainz, Germany.
Christof NiehrsInstitute of Molecular Biology (IMB), Mainz, Germany.
Institute of Molecular Biology · DEHeidelberg University · DE

Funding

European Research Council 249826
6 · The paper itself

Abstract

DNA 5-methylcytosine is a dynamic epigenetic mark with important roles in development and disease. In the Tet-Tdg demethylation pathway, methylated cytosine is iteratively oxidized by Tet dioxygenases, and unmodified cytosine is restored via thymine DNA glycosylase (Tdg). Here we show that human NEIL1 and NEIL2 DNA glycosylases coordinate abasic-site processing during TET-TDG DNA demethylation. NEIL1 and NEIL2 cooperate with TDG during base excision: TDG occupies the abasic site and is displaced by NEILs, which further process the baseless sugar, thereby stimulating TDG-substrate turnover. In early Xenopus embryos, Neil2 cooperates with Tdg in removing oxidized methylcytosines and specifying neural-crest development together with Tet3. Thus, Neils function as AP lyases in the coordinated AP-site handover during oxidative DNA demethylation.

Indexed as

DNA MethylationDNA RepairAnimalsBasic Helix-Loop-Helix ProteinsCell Line, TumorDioxygenasesDNA-(Apurinic or Apyrimidinic Site) LyaseDNA GlycosylasesHEK293 CellsHeLa CellsHumansThymine DNA GlycosylaseXenopusBasic Helix-Loop-Helix ProteinsDioxygenasesDNA-(Apurinic or Apyrimidinic Site) LyaseDNA GlycosylasesNEIL1 protein, humanNEIL2 protein, humanTCF21 protein, humanThymine DNA Glycosylase

Identifiers

PMID26751644
PMCPMC4894546
OpenAlexW2255354927

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.