Evidence map›Paper›PMID 26751470›Full record

ArticleViruses2016

Direct Identification of Enteroviruses in Cerebrospinal Fluid of Patients with Suspected Meningitis by Nested PCR Amplification.

Alexandr Krasota, Natalia Loginovskih, Olga Ivanova, Galina Lipskaya

Open access · goldAbstract readEvaluation Study
In one paragraph

Article in Viruses, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 28 citations in OpenAlex.

  1. Review
  2. Article
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  5. Next generation sequencing of human enterovirus strains from an outbreak of enterovirus A71 shows applicability to outbreak investigations.Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Alexandr KrasotaBelozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Moscow 119899, Russia. krasota@belozersky.msu.ru.
Natalia LoginovskihHygienic and Epidemiological Center in the Omsk Region, Omsk 644116, Russia. polioom@mail.ru.
Olga IvanovaChumakov Institute of Poliomyelitis and Viral Encephalitides, Moscow 142782, Russia. poliom@aha.ru.
Galina LipskayaBelozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Moscow 119899, Russia. galina.lipskaya@gmail.com.
Chumakov Institute of Poliomyelitis and Viral Encephalitides · RUBudgetary Health Care Institution of the Omsk Region "Clinical Oncology Center" · RULomonosov Moscow State University · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Enteroviruses, the most common human viral pathogens worldwide, have been associated with serous meningitis, encephalitis, syndrome of acute flaccid paralysis, myocarditis and the onset of diabetes type 1. In the future, the rapid identification of the etiological agent would allow to adjust the therapy promptly and thereby improve the course of the disease and prognosis. We developed RT-nested PCR amplification of the genomic region coding viral structural protein VP1 for direct identification of enteroviruses in clinical specimens and compared it with the existing analogs. One-hundred-fifty-nine cerebrospinal fluids (CSF) from patients with suspected meningitis were studied. The amplification of VP1 genomic region using the new method was achieved for 86 (54.1%) patients compared with 75 (47.2%), 53 (33.3%) and 31 (19.5%) achieved with previously published methods. We identified 11 serotypes of the Enterovirus species B in 2012, including relatively rare echovirus 14 (E-14), E-15 and E-32, and eight serotypes of species B and 5 enteroviruses A71 (EV-A71) in 2013. The developed method can be useful for direct identification of enteroviruses in clinical material with the low virus loads such as CSF.

Indexed as

AdolescentAdultChildChild, PreschoolEnterovirusEnterovirus InfectionsFemaleGenotypeHumansMaleMeningitisPolymerase Chain ReactionRetrospective StudiesViral ProteinsYoung AdultViral Proteinscerebrospinal fluids (CSF)detectiondirect genotypingEnterovirusidentificationnested PCRsequencing

Identifiers

PMID26751470
PMCPMC4728570
OpenAlexW2226726974

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.