Evidence map›Paper›PMID 26751435›Full record

ArticleMolecules (Basel, Switzerland)2016

Isolation and Biosynthetic Analysis of Haliamide, a New PKS-NRPS Hybrid Metabolite from the Marine Myxobacterium Haliangium ochraceum.

Yuwei Sun, Tomohiko Tomura, Junichi Sato, Takashi Iizuka, Ryosuke Fudou, Makoto Ojika

Open access · goldAbstract read
In one paragraph

Article in Molecules (Basel, Switzerland), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
8.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 50 citations in OpenAlex.

  1. Review
  2. Green manure (Frontiers in microbiology · 2024
    Article
  3. Review
  4. Review
  5. Review
  6. Review
  7. Draft Genome Sequence ofMicrobiology resource announcements · 2020
    Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Review
  15. Review
  16. Review
  17. Review
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Yuwei SunGraduate School of Bioagricultural Sciences, Nagoya University, Furo-cho, Chikusa-ku, Nagoya 464-8601, Japan. ch3cook@gmail.com.
Tomohiko TomuraGraduate School of Bioagricultural Sciences, Nagoya University, Furo-cho, Chikusa-ku, Nagoya 464-8601, Japan. tomura.tomohiko@a.mbox.nagoya-u.ac.jp.
Junichi SatoGraduate School of Bioagricultural Sciences, Nagoya University, Furo-cho, Chikusa-ku, Nagoya 464-8601, Japan. john-smith-11@live.jp.
Takashi IizukaInstitute for Innovation, Ajinomoto Co., Inc., Kawasaki, Kanagawa 210-8681, Japan. takashi_iizuka@ajinomoto.com.
Ryosuke FudouR & D Planning Department, Ajinomoto Co., Inc., Chuo-ku, Tokyo 104-8315, Japan. ryosuke_fudou@ajinomoto.com.
Makoto OjikaGraduate School of Bioagricultural Sciences, Nagoya University, Furo-cho, Chikusa-ku, Nagoya 464-8601, Japan. ojika@agr.nagoya-u.ac.jp.
Nagoya University · JPAjinomoto (Japan) · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Myxobacteria of marine origin are rare and hard-to-culture microorganisms, but they genetically harbor high potential to produce novel antibiotics. An extensive investigation on the secondary metabolome of the unique marine myxobacterium Haliangium ochraceum SMP-2 led to the isolation of a new polyketide-nonribosomal peptide hybrid product, haliamide (1). Its structure was elucidated by spectroscopic analyses including NMR and HR-MS. Haliamide (1) showed cytotoxicity against HeLa-S3 cells with IC50 of 12 μM. Feeding experiments were performed to identify the biosynthetic building blocks of 1, revealing one benzoate, one alanine, two propionates, one acetate and one acetate-derived terminal methylene. The biosynthetic gene cluster of haliamide (hla, 21.7 kbp) was characterized through the genome mining of the producer, allowing us to establish a model for the haliamide biosynthesis. The sulfotransferase (ST)-thioesterase (TE) domains encoded in hlaB appears to be responsible for the terminal alkene formation via decarboxylation.

Indexed as

MetabolomeAntineoplastic AgentsAquatic OrganismsBacterial ProteinsCell SurvivalDeltaproteobacteriaGene ExpressionHeLa CellsHumansInhibitory Concentration 50Multigene FamilyPeptidesPolyketidesProtein Structure, TertiarySulfotransferasesThiolester HydrolasesAntineoplastic AgentsBacterial ProteinsPeptidesPolyketidesSulfotransferasesThiolester HydrolasesbiosynthesishaliamideHaliangium ochraceummarine myxobacteriumpolyketide

Identifiers

PMID26751435
PMCPMC6274090
OpenAlexW2225793393

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.