ArticleScientific reports2016
Network-Based Comparative Analysis of Arabidopsis Immune Responses to Golovinomyces orontii and Botrytis cinerea Infections.
Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers, 1 of them a synthesis that pooled it.
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Who cites it
23 citing papers in PubMed, 1 synthesis or guideline pooled it, 46 citations in OpenAlex.
- Transcriptomic Landscape of Herbivore Oviposition in Arabidopsis: A Systematic Review.Frontiers in plant science · 2021Pooled it
- A Journey into Plant-Microbe Interactions: From Lab to Field for a Sustainable Agriculture.Advances in experimental medicine and biology · 2026Review
- Transcriptome-Wide Analysis of Core Transcription Factors Associated with Defense Responses in Autotetraploid versus Diploid Rice under Saline Stress and Recovery.International journal of molecular sciences · 2023Article
- SlBBX20 attenuates JA signalling and regulates resistance to Botrytis cinerea by inhibiting SlMED25 in tomato.Plant biotechnology journal · 2023Article
- Decoding Metabolic Reprogramming in Plants under Pathogen Attacks, a Comprehensive Review of Emerging Metabolomics Technologies to Maximize Their Applications.Metabolites · 2023Review
- An interolog-based barley interactome as an integration framework for immune signaling.Genetics · 2022Article
- Effect of zinc imbalance and salicylic acid co-supply on Arabidopsis response to fungal pathogens with different lifestyles.Plant biology (Stuttgart, Germany) · 2022Article
- Rootstock influences the effect of grapevine leafroll-associated viruses on berry development and metabolism via abscisic acid signalling.Molecular plant pathology · 2021Article
- In the tripartite combination Botrytis cinerea-Arabidopsis-Eurydema oleracea, the fungal pathogen alters the plant-insect interaction via jasmonic acid signalling activation and inducible plant-emitted volatiles.Journal of plant research · 2021Article
- Removing auto-activators from yeast-two-hybrid assays by conditional negative selection.Scientific reports · 2021Article
- Innate Resistance and Phosphite Treatment Affect Both the Pathogen's and Host's Transcriptomes in the Tanoak-Journal of fungi (Basel, Switzerland) · 2021Article
- Revisiting the Role of Transcription Factors in Coordinating the Defense Response AgainstViruses · 2019Article
- Comparative transcriptome analysis shows the defense response networks regulated by miR482b.Plant cell reports · 2019Article
- Network Modeling Unravels Mechanisms of Crosstalk between Ethylene and Salicylate Signaling in Potato.Plant physiology · 2018Article
- PlaD: A Transcriptomics Database for Plant Defense Responses to Pathogens, Providing New Insights into Plant Immune System.Genomics, proteomics & bioinformatics · 2018Article
- Large Scale Proteomic Data and Network-Based Systems Biology Approaches to Explore the Plant World.Proteomes · 2018Article
- Global temporal dynamic landscape of pathogen-mediated subversion of Arabidopsis innate immunity.Scientific reports · 2017Article
- CrY2H-seq: a massively multiplexed assay for deep-coverage interactome mapping.Nature methods · 2017Article
- Large-scale transcriptome analysis reveals arabidopsis metabolic pathways are frequently influenced by different pathogens.Plant molecular biology · 2017Article
- Integrating Early Transcriptomic Responses to Rhizotoxins in Rice (Frontiers in plant science · 2017Article
Corrections and comments
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Authors and funding
3 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
A comprehensive exploration of common and specific plant responses to biotrophs and necrotrophs is necessary for a better understanding of plant immunity. Here, we compared the Arabidopsis defense responses evoked by the biotrophic fungus Golovinomyces orontii and the necrotrophic fungus Botrytis cinerea through integrative network analysis. Two time-course transcriptional datasets were integrated with an Arabidopsis protein-protein interaction (PPI) network to construct a G. orontii conditional PPI sub-network (gCPIN) and a B. cinerea conditional PPI sub-network (bCPIN). We found that hubs in gCPIN and bCPIN played important roles in disease resistance. Hubs in bCPIN evolved faster than hubs in gCPIN, indicating the different selection pressures imposed on plants by different pathogens. By analyzing the common network from gCPIN and bCPIN, we identified two network components in which the genes were heavily involved in defense and development, respectively. The co-expression relationships between interacting proteins connecting the two components were different under G. orontii and B. cinerea infection conditions. Closer inspection revealed that auxin-related genes were overrepresented in the interactions connecting these two components, suggesting a critical role of auxin signaling in regulating the different co-expression relationships. Our work may provide new insights into plant defense responses against pathogens with different lifestyles.
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