Evidence map›Paper›PMID 26749307›Full record

ArticleAmerican journal of human genetics2016

Maternal Modifiers and Parent-of-Origin Bias of the Autism-Associated 16p11.2 CNV.

Michael H Duyzend, Xander Nuttle, Bradley P Coe, Carl Baker, Deborah A Nickerson, Raphael Bernier, Evan E Eichler

Open access · bronzeAbstract read
In one paragraph

Article in American journal of human genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed, 1 pooled it
4.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 1 synthesis or guideline pooled it, 64 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Review
  5. Review
  6. Sex-dependent prediction of autism.Frontiers in genetics · 2026
    Article
  7. Article
  8. Review
  9. Article
  10. The pleiotropic spectrum of proximal 16p11.2 CNVs.American journal of human genetics · 2024
    Review
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Overexpression of CD47 is associated with brain overgrowth and 16p11.2 deletion syndrome.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Michael H DuyzendDepartment of Genome Sciences, School of Medicine, University of Washington, Seattle, WA 98195, USA.
Xander NuttleDepartment of Genome Sciences, School of Medicine, University of Washington, Seattle, WA 98195, USA.
Bradley P CoeDepartment of Genome Sciences, School of Medicine, University of Washington, Seattle, WA 98195, USA.
Carl BakerDepartment of Genome Sciences, School of Medicine, University of Washington, Seattle, WA 98195, USA.
Deborah A NickersonDepartment of Genome Sciences, School of Medicine, University of Washington, Seattle, WA 98195, USA.
Raphael BernierDepartment of Psychiatry and Behavioral Sciences, University of Washington, Seattle, WA 98195, USA.
Evan E EichlerDepartment of Genome Sciences, School of Medicine, University of Washington, Seattle, WA 98195, USA; Howard Hughes Medical Institute, Seattle, WA 98195, USA. Electronic address: eee@gs.washington.edu.
University of Washington · USHoward Hughes Medical Institute · US

Funding

University of Washington Medical Scientist Training Program: MD/PhDT32GM007266 · NIGMS · UNIVERSITY OF WASHINGTON · PI HORWITZ, MARSHALL S. · 1985 to 2023
$30.4M
Sporadic Mutations and Autism Spectrum DisordersR01MH101221 · NIMH · UNIVERSITY OF WASHINGTON · PI EICHLER, EVAN · 2013 to 2025
$9.2M
Intellectual and Developmental Disabilities Research CenterU54HD083091 · NICHD · UNIVERSITY OF WASHINGTON · PI DOHERTY, DANIEL · 2014 to 2019
$7.9M
The genetic basis underlying the phenotype heterogeneity of the 16p11.2 CNVF30MH105055 · NIMH · UNIVERSITY OF WASHINGTON · PI DUYZEND, MICHAEL H · 2014 to 2017
$177k
Howard Hughes Medical InstituteMedical Research Council G1001799Medical Research Council MR/N01104X/1NICHD NIH HHS U54 HD083091NIGMS NIH HHS T32 GM007266NIMH NIH HHS 1F30MH105055-01NIMH NIH HHS F30 MH105055NIMH NIH HHS R01 MH101221NIMH NIH HHS R01MH101221
6 · The paper itself

Abstract

Recurrent deletions and duplications at chromosomal region 16p11.2 are a major genetic contributor to autism but also associate with a wider range of pediatric diagnoses, including intellectual disability, coordination disorder, and language disorder. In order to investigate the potential genetic basis for phenotype variability, we assessed the parent of origin of the 16p11.2 copy-number variant (CNV) and the presence of additional CNVs in 126 families for which detailed phenotype data were available. Among de novo cases, we found a strong maternal bias for the origin of deletions (59/66, 89.4% of cases, p = 2.38 × 10(-11)), the strongest such effect so far observed for a CNV associated with a microdeletion syndrome. In contrast to de novo events, we observed no transmission bias for inherited 16p11.2 CNVs, consistent with a female meiotic hotspot of unequal crossover driving this maternal bias. We analyzed this 16p11.2 CNV cohort for the presence of secondary CNVs and found a significant maternal transmission bias for secondary deletions (32 maternal versus 14 paternal, p = 1.14 × 10(-2)). Of the secondary deletions that disrupted a gene, 82% were either maternally inherited or de novo (p = 4.3 × 10(-3)). Nine probands carry secondary CNVs that disrupt genes associated with autism and/or intellectual disability risk variants. Our findings demonstrate a strong bias toward maternal origin of 16p11.2 de novo deletions as well as a maternal transmission bias for secondary deletions that contribute to the clinical outcome on a background sensitized by the 16p11.2 CNV.

Indexed as

Chromosomes, Human, Pair 16Genomic ImprintingAutistic DisorderCohort StudiesCrossing Over, GeneticDNA Copy Number VariationsFemaleHumansMalePolymorphism, Single NucleotideRecombination, Genetic

Identifiers

PMID26749307
PMCPMC4716684
OpenAlexW2210849364

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.