Evidence map›Paper›PMID 26748915›Full record

ArticlePlanta2016

The plastidial starch phosphorylase from rice endosperm: catalytic properties at low temperature.

Seon-Kap Hwang, Salvinder Singh, Bilal Cakir, Hikaru Satoh, Thomas W Okita

Abstract read
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Article in Planta, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.7field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 40 citations in OpenAlex.

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  9. Frontiers in plant science · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 3 countries.

Seon-Kap HwangInstitute of Biological Chemistry, Washington State University, Pullman, WA, 99164, USA.
Salvinder SinghDepartment of Agricultural Biotechnology, Assam Agricultural University, Jorhat, Assam, 785013, India.
Bilal CakirInstitute of Biological Chemistry, Washington State University, Pullman, WA, 99164, USA.
Hikaru SatohFaculty of Agriculture, Kyushu University, Fukuoka, 812-8581, Japan.
Thomas W OkitaInstitute of Biological Chemistry, Washington State University, Pullman, WA, 99164, USA. okita@wsu.edu.
Washington State University · USAssam Agricultural University · INKyushu University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

MAIN

conclusionConsistent with its essential role in starch biosynthesis at low temperatures, the plastidial starch phosphorylase from rice endosperm is highly active at low temperature. Moreover, contrary to results on other higher plant phosphorylases, the L80 peptide, a domain unique to plant phosphorylases and not present in orthologous phosphorylases from other organisms, is not involved in enzyme catalysis. Starch phosphorylase (Pho) is an essential enzyme in starch synthesis in developing rice endosperm as the enzyme plays a critical role in both the early and maturation phases of starch granule formation especially at low temperature. In this study, we demonstrated that the rice Pho1 maintains substantial enzyme activity at low temperature (<20 °C) and its substrate affinities for branched α-glucans and glucose-1-phosphate were significantly increased at the lower reaction temperatures. Under sub-saturating substrate conditions, OsPho1 displayed higher catalytic activities at 18 °C than at optimal 36 °C, supporting the prominent role of the enzyme in starch synthesis at low temperature. Removal of the highly charged 80-amino acid sequence L80 peptide, a region found exclusively in the plastidial Pho1 of higher plants, did not significantly alter the catalytic and regulatory properties of OsPho1 but did affect heat stability. Our kinetic results support the low temperature biosynthetic role of OsPho1 in rice endosperm and indicate that its L80 region is unlikely to have a direct enzymatic role but provides stability of the enzyme under heat stress.

Indexed as

CatalysisEndospermOryzaPlant ProteinsPlastidsProtein DomainsStarch PhosphorylaseTemperaturePlant ProteinsStarch PhosphorylaseHeat stabilityLow temperatureRice endospermStarch phosphorylaseStarch synthesis

Identifiers

PMID26748915
OpenAlexW2223016903

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.