Evidence map›Paper›PMID 26748914›Full record

ArticlePlanta2016

Functional analysis of the Arabidopsis thaliana MUTE promoter reveals a regulatory region sufficient for stomatal-lineage expression.

Aaron K Mahoney, Elizabeth M Anderson, Rachael A Bakker, Anthony F Williams, Jake J Flood, Katrina C Sullivan, Lynn J Pillitteri

Abstract read
In one paragraph

Article in Planta, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. The diversity of stomatal development regulation inProceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Aaron K MahoneyDepartment of Biology, Western Washington University, Bellingham, WA, 98225, USA.
Elizabeth M AndersonDepartment of Biology, Western Washington University, Bellingham, WA, 98225, USA.
Rachael A BakkerDepartment of Biology, Western Washington University, Bellingham, WA, 98225, USA.
Anthony F WilliamsDepartment of Biology, Western Washington University, Bellingham, WA, 98225, USA.
Jake J FloodDepartment of Biology, Western Washington University, Bellingham, WA, 98225, USA.
Katrina C SullivanDepartment of Biology, Western Washington University, Bellingham, WA, 98225, USA.
Lynn J PillitteriDepartment of Biology, Western Washington University, Bellingham, WA, 98225, USA. lynn.pillitteri@wwu.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

MAIN

conclusionThe MUTE promoter contains a 175-bp region rich in Dof regulatory elements (AAAG) that is necessary and sufficient for initiation of transcription in meristemoids and the stomatal lineage. The molecular mechanism underlying the decision to divide or differentiate is a central question in developmental biology. During stomatal development, expression of the master regulator MUTE triggers the differentiation of meristemoids into stomata. In this study, we carried out MUTE promoter deletion analysis to define a regulatory region that promotes the initiation of expression in meristemoids. Expression constructs with truncated promoter fragments fused to β-glucuronidase (GUS) were developed. The full-length promoter and promoter truncations of at least 500 bp from the translational start site exhibited normal spatiotemporal expression patterns. Further truncation revealed a 175-bp promoter fragment that was necessary and sufficient for stomatal-lineage expression. Known cis-elements were identified and tested for functional relevance. Comparison of orthologous MUTE promoters suggested DNA binding with one finger (Dof) regulatory elements and novel motifs may be important for regulation. Our data highlight the complexity and combinatorial control of gene regulation and provides tools to further investigate the genetic control of stomatal development.

Indexed as

Gene Expression Regulation, PlantPromoter Regions, GeneticRegulatory Sequences, Ribonucleic AcidArabidopsisArabidopsis ProteinsBinding SitesBrassicaceaeComputer SimulationGlucuronidasePlants, Genetically ModifiedPlant StomataUntranslated RegionsArabidopsis ProteinsGlucuronidaseRegulatory Sequences, Ribonucleic AcidUntranslated RegionsArabidopsisCis-elementMeristemoidMUTEPromoterStomata

Identifiers

PMID26748914
PMCPMC4819751

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.