Evidence map›Paper›PMID 26748787›Full record

ArticleChemMedChem2016

Identification and Optimization of Anthranilic Acid Based Inhibitors of Replication Protein A.

James D Patrone, Nicholas F Pelz, Brittney S Bates, Elaine M Souza-Fagundes, Bhavatarini Vangamudi, Demarco V Camper, Alexey G Kuznetsov, Carrie F Browning, Michael D Feldkamp, Andreas O Frank and 6 more

Open access · greenAbstract read
In one paragraph

Article in ChemMedChem, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 2 institutions in 1 country.

James D PatroneDepartment of Biochemistry, Vanderbilt University, Nashville, TN, 37232, USA.
Nicholas F PelzDepartment of Biochemistry, Vanderbilt University, Nashville, TN, 37232, USA.
Brittney S BatesDepartment of Biochemistry, Vanderbilt University, Nashville, TN, 37232, USA.
Elaine M Souza-FagundesDepartment of Biochemistry, Vanderbilt University, Nashville, TN, 37232, USA.
Bhavatarini VangamudiDepartment of Biochemistry, Vanderbilt University, Nashville, TN, 37232, USA.
Demarco V CamperDepartment of Biochemistry, Vanderbilt University, Nashville, TN, 37232, USA.
Alexey G KuznetsovDepartment of Biochemistry, Vanderbilt University, Nashville, TN, 37232, USA.
Carrie F BrowningDepartment of Biochemistry, Vanderbilt University, Nashville, TN, 37232, USA.
Michael D FeldkampDepartment of Biochemistry, Vanderbilt University, Nashville, TN, 37232, USA.
Andreas O FrankDepartment of Biochemistry, Vanderbilt University, Nashville, TN, 37232, USA.
Benjamin A GilstonDepartment of Biochemistry, Vanderbilt University, Nashville, TN, 37232, USA.
Edward T OlejniczakDepartment of Biochemistry, Vanderbilt University, Nashville, TN, 37232, USA.
Olivia W RossaneseDepartment of Biochemistry, Vanderbilt University, Nashville, TN, 37232, USA.
Alex G WatersonDepartment of Pharmacology, Vanderbilt University, Nashville, TN, 37232, USA.
Walter J ChazinDepartment of Biochemistry, Vanderbilt University, Nashville, TN, 37232, USA.
Stephen W FesikDepartment of Biochemistry, Vanderbilt University, Nashville, TN, 37232, USA. stephen.fesik@vanderbilt.edu.
Vanderbilt University · USRollins College · US

Funding

Transcription-Coupled & Replication-Associated Excision RepairP01CA092584 · NCI · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI John A. Tainer · 2001 to 2026
$89.6M
TRAINING PROGRAM IN ENVIRONMENTAL TOXICOLOGYT32ES007028 · NIEHS · VANDERBILT UNIVERSITY · PI F PETER Guengerich, Fiona Edith Harrison · 1985 to 2026
$15.7M
MOLECULAR BIOPHYSICS TRAINING PROGRAM AT VANDERBILTT32GM008320 · NIGMS · VANDERBILT UNIVERSITY · PI CHAZIN, WALTER J. · 1989 to 2023
$7.9M
The Vanderbilt Molecular Target Discovery and Development CenterRC2CA148375 · NCI · VANDERBILT UNIVERSITY · PI MARNETT, LAWRENCE J. · 2009 to 2010
$4.7M
Structural Basis for RPA Functions in DNA ProcessingR01GM065484 · NIGMS · VANDERBILT UNIVERSITY · PI CHAZIN, WALTER J. · 2003 to 2015
$3.9M
Expanding the druggable genomeDP1CA174419 · NCI · VANDERBILT UNIVERSITY · PI FESIK, STEPHEN W. · 2012 to 2014
$2.3M
Expanding the druggable genomeDP1OD006933 · OD · VANDERBILT UNIVERSITY · PI FESIK, STEPHEN W. · 2010 to 2011
$1.5M
Validating the protein binding domain of replication protein A as a cancer targetR01CA174887 · NCI · VANDERBILT UNIVERSITY · PI FESIK, STEPHEN W. · 2014 to 2017
$1.3M
GPU-Accelerated Parallel Computer for Drug Discovery ApplicationsS10OD020154 · OD · VANDERBILT UNIVERSITY · PI SMITH, JARROD ANSON · 2015 to 2015
$225k
Discovery of protein-protein interaction inhibitors of Replication Protein AF32CA174315 · NCI · VANDERBILT UNIVERSITY · PI PATRONE, JAMES · 2013 to 2015
$130k
Development of Chemical Probes Against the 70N and 32C Domains of RPAF32ES021690 · NIEHS · VANDERBILT UNIVERSITY · PI FELDKAMP, MICHAEL DENNIS · 2012 to 2013
$106k
Cancer Research UK 11566CCR NIH HHS 5RC2A148375NCCDPHP CDC HHS 8DP1A174419NCI NIH HHS DP1 CA174419NCI NIH HHS F32 CA174315NCI NIH HHS F32CA174315-02NCI NIH HHS P01 CA092584NCI NIH HHS P01CA092584NCI NIH HHS R01 CA174887NCI NIH HHS RC2 CA148375NIEHS NIH HHS F32 ES021690NIEHS NIH HHS F32ES021690-01NIEHS NIH HHS T32 ES007028NIGMS NIH HHS R01 GM065484NIGMS NIH HHS T32 GM008320NIH HHS 5DP1OD006933NIH HHS DP1 OD006933PHS HHS R01M065484
6 · The paper itself

Abstract

Replication protein A (RPA) is an essential single-stranded DNA (ssDNA)-binding protein that initiates the DNA damage response pathway through protein-protein interactions (PPIs) mediated by its 70N domain. The identification and use of chemical probes that can specifically disrupt these interactions is important for validating RPA as a cancer target. A high-throughput screen (HTS) to identify new chemical entities was conducted, and 90 hit compounds were identified. From these initial hits, an anthranilic acid based series was optimized by using a structure-guided iterative medicinal chemistry approach to yield a cell-penetrant compound that binds to RPA70N with an affinity of 812 nm. This compound, 2-(3- (N-(3,4-dichlorophenyl)sulfamoyl)-4-methylbenzamido)benzoic acid (20 c), is capable of inhibiting PPIs mediated by this domain.

Indexed as

AnisotropyDose-Response Relationship, DrugFluorescence PolarizationHigh-Throughput Screening AssaysModels, MolecularMolecular Structureortho-AminobenzoatesReplication Protein AStructure-Activity Relationshipanthranilic acidortho-AminobenzoatesReplication Protein Ahigh-throughput screeninghit optimizationmedicinal chemistryprotein-protein interactionsreplication protein A

Identifiers

PMID26748787
PMCPMC4838552
OpenAlexW2224694903

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.