ArticleVirology2016
Identification of structural and morphogenesis genes of Pseudoalteromonas phage φRIO-1 and placement within the evolutionary history of Podoviridae.
Article in Virology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.
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Who cites it
21 citing papers in PubMed, 27 citations in OpenAlex.
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- Genomic Analysis of Two Cold-ActiveViruses · 2023Article
- Identification of Structural and Morphogenesis Genes ofViruses · 2023Article
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- Genomic Characterisation of UFJF_PfDIW6: A Novel LyticViruses · 2022Article
- Viral Ejection Proteins: Mosaically Conserved, Conformational Gymnasts.Microorganisms · 2022Review
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- Cryo-EM structure of the periplasmic tunnel of T7 DNA-ejectosome at 2.7 Å resolution.Molecular cell · 2021Article
- A Tail Fiber Protein and a Receptor-Binding Protein Mediate ICP2 Bacteriophage Interactions with Vibrio cholerae OmpU.Journal of bacteriology · 2021Article
- Identification of a novel bacterial receptor that binds tail tubular proteins and mediates phage infection ofEmerging microbes & infections · 2020Article
- Cobaviruses - a new globally distributed phage group infecting Rhodobacteraceae in marine ecosystems.The ISME journal · 2019Article
- Global Proteomic Profiling ofJournal of virology · 2019Article
- Novel N4-Like Bacteriophages of Pectobacterium atrosepticum.Pharmaceuticals (Basel, Switzerland) · 2018Article
- Polyvalent Proteins, a Pervasive Theme in the Intergenomic Biological Conflicts of Bacteriophages and Conjugative Elements.Journal of bacteriology · 2017Article
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- "French Phage Network"-Second Meeting Report.Viruses · 2017Article
- Large Preferred Region for Packaging of Bacterial DNA by phiC725A, a Novel Pseudomonas aeruginosa F116-Like Bacteriophage.PloS one · 2017Article
- To Be or Not To Be T4: Evidence of a Complex Evolutionary Pathway of Head Structure and Assembly in GiantFrontiers in microbiology · 2017Article
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Authors and funding
6 authors at 4 institutions in 2 countries.
Funding
Abstract
The virion proteins of Pseudoalteromonas phage φRIO-1 were identified and quantitated by mass spectrometry and gel densitometry. Bioinformatic methods customized to deal with extreme divergence defined a φRIO-1 tail structure homology group of phages, which was further related to T7 tail and internal virion proteins (IVPs). Similarly, homologs of tubular tail components and internal virion proteins were identified in essentially all completely sequenced podoviruses other than those in the subfamily Picovirinae. The podoviruses were subdivided into several tail structure homology groups, in addition to the RIO-1 and T7 groups. Molecular phylogeny indicated that these groups all arose about the same ancient time as the φRIO-1/T7 split. Hence, the T7-like infection mechanism involving the IVPs was an ancestral property of most podoviruses. The IVPs were found to variably host both tail lysozyme domains and domains destined for the cytoplasm, including the N4 virion RNA polymerase embedded within an IVP-D homolog.
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