Evidence map›Paper›PMID 26747563›Full record

ArticleMolecular & cellular proteomics : MCP2016

Comparative Study of Early Cold-Regulated Proteins by Two-Dimensional Difference Gel Electrophoresis Reveals a Key Role for Phospholipase Dα1 in Mediating Cold Acclimation Signaling Pathway in Rice.

Chenmin Huo, Baowen Zhang, Hui Wang, Fawei Wang, Meng Liu, Yingjie Gao, Wenhua Zhang, Zhiping Deng, Daye Sun, Wenqiang Tang

Open access · hybridAbstract readComparative Study
In one paragraph

Article in Molecular & cellular proteomics : MCP, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
11.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 56 citations in OpenAlex.

  1. Article
  2. Article
  3. Cold stress in rice (Frontiers in plant science · 2025
    Review
  4. Article
  5. Article
  6. International journal of molecular sciences · 2023
    Article
  7. Article
  8. Review
  9. Article
  10. Article
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  13. Review
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  15. Article
  16. Article
  17. Response of photosynthetic capacity and antioxidative system of chloroplast in two wucai (Physiology and molecular biology of plants : an international journal of functional plant biology · 2020
    Article
  18. Review
  19. Proteomic Analysis of ArabidopsisFrontiers in plant science · 2019
    Article
  20. Shot-Gun Proteomic Analysis on Roots of ArabidopsisInternational journal of molecular sciences · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Chenmin HuoFrom the ‡Hebei Collaboration Innovation Center for Cell Signaling; Key Laboratory of Molecular and Cellular Biology of Ministry of Education; Hebei Key Laboratory of Molecular and Cellular Biology; College of Life Sciences, Hebei Normal University, Shijiazhuang, Hebei 050024, China; ‖College of Biology Science & Engineering, Hebei University of Economics & Business, Shijiazhuang, Hebei 050061, China.
Baowen ZhangFrom the ‡Hebei Collaboration Innovation Center for Cell Signaling; Key Laboratory of Molecular and Cellular Biology of Ministry of Education; Hebei Key Laboratory of Molecular and Cellular Biology; College of Life Sciences, Hebei Normal University, Shijiazhuang, Hebei 050024, China;
Hui WangFrom the ‡Hebei Collaboration Innovation Center for Cell Signaling; Key Laboratory of Molecular and Cellular Biology of Ministry of Education; Hebei Key Laboratory of Molecular and Cellular Biology; College of Life Sciences, Hebei Normal University, Shijiazhuang, Hebei 050024, China;
Fawei Wang§State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Life Sciences, Nanjing Agricultural University, Nanjing 210095, China;
Meng LiuFrom the ‡Hebei Collaboration Innovation Center for Cell Signaling; Key Laboratory of Molecular and Cellular Biology of Ministry of Education; Hebei Key Laboratory of Molecular and Cellular Biology; College of Life Sciences, Hebei Normal University, Shijiazhuang, Hebei 050024, China;
Yingjie GaoFrom the ‡Hebei Collaboration Innovation Center for Cell Signaling; Key Laboratory of Molecular and Cellular Biology of Ministry of Education; Hebei Key Laboratory of Molecular and Cellular Biology; College of Life Sciences, Hebei Normal University, Shijiazhuang, Hebei 050024, China;
Wenhua Zhang§State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Life Sciences, Nanjing Agricultural University, Nanjing 210095, China;
Zhiping Deng¶State Key Laboratory Breeding Base for Zhejiang Sustainable Pest and Disease Control, Institute of Virology and Biotechnology, Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, China;
Daye SunFrom the ‡Hebei Collaboration Innovation Center for Cell Signaling; Key Laboratory of Molecular and Cellular Biology of Ministry of Education; Hebei Key Laboratory of Molecular and Cellular Biology; College of Life Sciences, Hebei Normal University, Shijiazhuang, Hebei 050024, China;
Wenqiang TangFrom the ‡Hebei Collaboration Innovation Center for Cell Signaling; Key Laboratory of Molecular and Cellular Biology of Ministry of Education; Hebei Key Laboratory of Molecular and Cellular Biology; College of Life Sciences, Hebei Normal University, Shijiazhuang, Hebei 050024, China; tangwq@mail.hebtu.edu.cn.
Hebei Normal University · CNMinistry of Education of the People's Republic of China · CNNanjing Agricultural University · CNToxicologie, Pharmacologie et Signalisation Cellulaire · FRZheJiang Academy of Agricultural Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To understand the early signaling steps that regulate cold responses in rice, two-dimensional difference gel electrophoresis (2-D DIGE)(1)was used to study early cold-regulated proteins in rice seedlings. Using mass spectrometry, 32 spots, which represent 26 unique proteins that showed an altered expression level within 5 min of cold treatment were identified. Among these proteins, Western blot analyses confirmed that the cellular phospholipase D α1 (OsPLDα1) protein level was increased as early as 1 min after cold treatment. Genetic studies showed that reducing the expression ofOsPLDα1makes rice plants more sensitive to chilling stress as well as cold acclimation increased freezing tolerance. Correspondingly, cold-regulated proteomic changes and the expression of the cold-responsive C repeat/dehydration-responsive element binding 1 (OsDREB1) family of transcription factors were inhibited in thepldα1mutant. We also found that the expression ofOsPLDα1is directly regulated by OsDREB1A. This transcriptional regulation ofOsPLDα1could provide positive feedback regulation of the cold signal transduction pathway in rice. OsPLDα1 hydrolyzes phosphatidylcholine to produce the signal molecule phosphatidic acid (PA). By lipid-overlay assay, we demonstrated that the rice cold signaling proteins, MAP kinase 6 (OsMPK6) and OsSIZ1, bind directly to PA. Taken together, our results suggest that OsPLDα1 plays a key role in transducing cold signaling in rice by producing PA and regulatingOsDREB1s' expression by OsMPK6, OsSIZ1, and possibly other PA-binding proteins.

Indexed as

AcclimatizationCold TemperatureGene Expression Regulation, PlantOryzaPhosphatidic AcidsPhospholipase DPlant ProteinsProteomicsSignal TransductionTwo-Dimensional Difference Gel ElectrophoresisPhosphatidic AcidsPhospholipase DPlant Proteins

Identifiers

PMID26747563
PMCPMC4824863
OpenAlexW2229646491

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.