Evidence map›Paper›PMID 26747287›Full record

ArticlePlant physiology2016

Deficiency of Starch Synthase IIIa and IVb Alters Starch Granule Morphology from Polyhedral to Spherical in Rice Endosperm.

Yoshiko Toyosawa, Yasushi Kawagoe, Ryo Matsushima, Naoko Crofts, Masahiro Ogawa, Masako Fukuda, Toshihiro Kumamaru, Yozo Okazaki, Miyako Kusano, Kazuki Saito and 6 more

Open access · greenAbstract read
In one paragraph

Article in Plant physiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 69 papers.

0numbers the graph read from it
0cells of the map it votes in
69citing papers in PubMed
11.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

69 citing papers in PubMed, 156 citations in OpenAlex.

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  13. Development of phytochemical genomics: From decoding metabolome to functional genomics and biotechnology of plant metabolism.Proceedings of the Japan Academy. Series B, Physical and biological sciences · 2025
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  14. Mutations in starch BRANCHING ENZYME 2a suppress the traits caused by the loss of ISOAMYLASE1 in barley.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
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  15. Article
  16. Review
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  18. Review
  19. Loss of function ofProceedings of the National Academy of Sciences of the United States of America · 2023
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9 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 8 institutions in 2 countries.

Yoshiko ToyosawaDepartment of Biological Production, Akita Prefectural University, Akita City, Akita 010-0195, Japan (Y.T., N.C., Y.N., N.F.);Division of Plant Sciences, National Institute of Agrobiological Sciences, Tsukuba 305-8602, Japan (Y.K.);Institute of Plant Science and Resources, Okayama University, Kurashiki 710-0046, Japan (R.M.);Department of General Education, Yamaguchi Prefectural University, Yamaguchi 753-8502, Japan (M.O.);Plant Genetic Resources, Institute of Genetic Resources, Faculty of Agriculture, Kyushu University, Fukuoka 812-8581, Japan (M.F., T.K.);RIKEN Center for Sustainable Resource Science, Tsurumi-ku, Yokohama 230-0045, Japan (Y.O., M.K., K.S., K.T., M.S.);Graduate School of Pharmaceutical Sciences, Chiba University, Chuo-ku, Chiba 260-8675, Japan (K.S.); andDepartment of Food Science and Human Nutrition, Iowa State University, Ames, Iowa 50011-1120 (Y.A., J.-L.J.).
Yasushi KawagoeDepartment of Biological Production, Akita Prefectural University, Akita City, Akita 010-0195, Japan (Y.T., N.C., Y.N., N.F.);Division of Plant Sciences, National Institute of Agrobiological Sciences, Tsukuba 305-8602, Japan (Y.K.);Institute of Plant Science and Resources, Okayama University, Kurashiki 710-0046, Japan (R.M.);Department of General Education, Yamaguchi Prefectural University, Yamaguchi 753-8502, Japan (M.O.);Plant Genetic Resources, Institute of Genetic Resources, Faculty of Agriculture, Kyushu University, Fukuoka 812-8581, Japan (M.F., T.K.);RIKEN Center for Sustainable Resource Science, Tsurumi-ku, Yokohama 230-0045, Japan (Y.O., M.K., K.S., K.T., M.S.);Graduate School of Pharmaceutical Sciences, Chiba University, Chuo-ku, Chiba 260-8675, Japan (K.S.); andDepartment of Food Science and Human Nutrition, Iowa State University, Ames, Iowa 50011-1120 (Y.A., J.-L.J.).
Ryo MatsushimaDepartment of Biological Production, Akita Prefectural University, Akita City, Akita 010-0195, Japan (Y.T., N.C., Y.N., N.F.);Division of Plant Sciences, National Institute of Agrobiological Sciences, Tsukuba 305-8602, Japan (Y.K.);Institute of Plant Science and Resources, Okayama University, Kurashiki 710-0046, Japan (R.M.);Department of General Education, Yamaguchi Prefectural University, Yamaguchi 753-8502, Japan (M.O.);Plant Genetic Resources, Institute of Genetic Resources, Faculty of Agriculture, Kyushu University, Fukuoka 812-8581, Japan (M.F., T.K.);RIKEN Center for Sustainable Resource Science, Tsurumi-ku, Yokohama 230-0045, Japan (Y.O., M.K., K.S., K.T., M.S.);Graduate School of Pharmaceutical Sciences, Chiba University, Chuo-ku, Chiba 260-8675, Japan (K.S.); andDepartment of Food Science and Human Nutrition, Iowa State University, Ames, Iowa 50011-1120 (Y.A., J.-L.J.).
Naoko CroftsDepartment of Biological Production, Akita Prefectural University, Akita City, Akita 010-0195, Japan (Y.T., N.C., Y.N., N.F.);Division of Plant Sciences, National Institute of Agrobiological Sciences, Tsukuba 305-8602, Japan (Y.K.);Institute of Plant Science and Resources, Okayama University, Kurashiki 710-0046, Japan (R.M.);Department of General Education, Yamaguchi Prefectural University, Yamaguchi 753-8502, Japan (M.O.);Plant Genetic Resources, Institute of Genetic Resources, Faculty of Agriculture, Kyushu University, Fukuoka 812-8581, Japan (M.F., T.K.);RIKEN Center for Sustainable Resource Science, Tsurumi-ku, Yokohama 230-0045, Japan (Y.O., M.K., K.S., K.T., M.S.);Graduate School of Pharmaceutical Sciences, Chiba University, Chuo-ku, Chiba 260-8675, Japan (K.S.); andDepartment of Food Science and Human Nutrition, Iowa State University, Ames, Iowa 50011-1120 (Y.A., J.-L.J.).ORCID http://orcid.org/0000-0002-6792-2232
Masahiro OgawaDepartment of Biological Production, Akita Prefectural University, Akita City, Akita 010-0195, Japan (Y.T., N.C., Y.N., N.F.);Division of Plant Sciences, National Institute of Agrobiological Sciences, Tsukuba 305-8602, Japan (Y.K.);Institute of Plant Science and Resources, Okayama University, Kurashiki 710-0046, Japan (R.M.);Department of General Education, Yamaguchi Prefectural University, Yamaguchi 753-8502, Japan (M.O.);Plant Genetic Resources, Institute of Genetic Resources, Faculty of Agriculture, Kyushu University, Fukuoka 812-8581, Japan (M.F., T.K.);RIKEN Center for Sustainable Resource Science, Tsurumi-ku, Yokohama 230-0045, Japan (Y.O., M.K., K.S., K.T., M.S.);Graduate School of Pharmaceutical Sciences, Chiba University, Chuo-ku, Chiba 260-8675, Japan (K.S.); andDepartment of Food Science and Human Nutrition, Iowa State University, Ames, Iowa 50011-1120 (Y.A., J.-L.J.).
Masako FukudaDepartment of Biological Production, Akita Prefectural University, Akita City, Akita 010-0195, Japan (Y.T., N.C., Y.N., N.F.);Division of Plant Sciences, National Institute of Agrobiological Sciences, Tsukuba 305-8602, Japan (Y.K.);Institute of Plant Science and Resources, Okayama University, Kurashiki 710-0046, Japan (R.M.);Department of General Education, Yamaguchi Prefectural University, Yamaguchi 753-8502, Japan (M.O.);Plant Genetic Resources, Institute of Genetic Resources, Faculty of Agriculture, Kyushu University, Fukuoka 812-8581, Japan (M.F., T.K.);RIKEN Center for Sustainable Resource Science, Tsurumi-ku, Yokohama 230-0045, Japan (Y.O., M.K., K.S., K.T., M.S.);Graduate School of Pharmaceutical Sciences, Chiba University, Chuo-ku, Chiba 260-8675, Japan (K.S.); andDepartment of Food Science and Human Nutrition, Iowa State University, Ames, Iowa 50011-1120 (Y.A., J.-L.J.).
Toshihiro KumamaruDepartment of Biological Production, Akita Prefectural University, Akita City, Akita 010-0195, Japan (Y.T., N.C., Y.N., N.F.);Division of Plant Sciences, National Institute of Agrobiological Sciences, Tsukuba 305-8602, Japan (Y.K.);Institute of Plant Science and Resources, Okayama University, Kurashiki 710-0046, Japan (R.M.);Department of General Education, Yamaguchi Prefectural University, Yamaguchi 753-8502, Japan (M.O.);Plant Genetic Resources, Institute of Genetic Resources, Faculty of Agriculture, Kyushu University, Fukuoka 812-8581, Japan (M.F., T.K.);RIKEN Center for Sustainable Resource Science, Tsurumi-ku, Yokohama 230-0045, Japan (Y.O., M.K., K.S., K.T., M.S.);Graduate School of Pharmaceutical Sciences, Chiba University, Chuo-ku, Chiba 260-8675, Japan (K.S.); andDepartment of Food Science and Human Nutrition, Iowa State University, Ames, Iowa 50011-1120 (Y.A., J.-L.J.).
Yozo OkazakiDepartment of Biological Production, Akita Prefectural University, Akita City, Akita 010-0195, Japan (Y.T., N.C., Y.N., N.F.);Division of Plant Sciences, National Institute of Agrobiological Sciences, Tsukuba 305-8602, Japan (Y.K.);Institute of Plant Science and Resources, Okayama University, Kurashiki 710-0046, Japan (R.M.);Department of General Education, Yamaguchi Prefectural University, Yamaguchi 753-8502, Japan (M.O.);Plant Genetic Resources, Institute of Genetic Resources, Faculty of Agriculture, Kyushu University, Fukuoka 812-8581, Japan (M.F., T.K.);RIKEN Center for Sustainable Resource Science, Tsurumi-ku, Yokohama 230-0045, Japan (Y.O., M.K., K.S., K.T., M.S.);Graduate School of Pharmaceutical Sciences, Chiba University, Chuo-ku, Chiba 260-8675, Japan (K.S.); andDepartment of Food Science and Human Nutrition, Iowa State University, Ames, Iowa 50011-1120 (Y.A., J.-L.J.).
Miyako KusanoDepartment of Biological Production, Akita Prefectural University, Akita City, Akita 010-0195, Japan (Y.T., N.C., Y.N., N.F.);Division of Plant Sciences, National Institute of Agrobiological Sciences, Tsukuba 305-8602, Japan (Y.K.);Institute of Plant Science and Resources, Okayama University, Kurashiki 710-0046, Japan (R.M.);Department of General Education, Yamaguchi Prefectural University, Yamaguchi 753-8502, Japan (M.O.);Plant Genetic Resources, Institute of Genetic Resources, Faculty of Agriculture, Kyushu University, Fukuoka 812-8581, Japan (M.F., T.K.);RIKEN Center for Sustainable Resource Science, Tsurumi-ku, Yokohama 230-0045, Japan (Y.O., M.K., K.S., K.T., M.S.);Graduate School of Pharmaceutical Sciences, Chiba University, Chuo-ku, Chiba 260-8675, Japan (K.S.); andDepartment of Food Science and Human Nutrition, Iowa State University, Ames, Iowa 50011-1120 (Y.A., J.-L.J.).
Kazuki SaitoDepartment of Biological Production, Akita Prefectural University, Akita City, Akita 010-0195, Japan (Y.T., N.C., Y.N., N.F.);Division of Plant Sciences, National Institute of Agrobiological Sciences, Tsukuba 305-8602, Japan (Y.K.);Institute of Plant Science and Resources, Okayama University, Kurashiki 710-0046, Japan (R.M.);Department of General Education, Yamaguchi Prefectural University, Yamaguchi 753-8502, Japan (M.O.);Plant Genetic Resources, Institute of Genetic Resources, Faculty of Agriculture, Kyushu University, Fukuoka 812-8581, Japan (M.F., T.K.);RIKEN Center for Sustainable Resource Science, Tsurumi-ku, Yokohama 230-0045, Japan (Y.O., M.K., K.S., K.T., M.S.);Graduate School of Pharmaceutical Sciences, Chiba University, Chuo-ku, Chiba 260-8675, Japan (K.S.); andDepartment of Food Science and Human Nutrition, Iowa State University, Ames, Iowa 50011-1120 (Y.A., J.-L.J.).
Kiminori ToyookaDepartment of Biological Production, Akita Prefectural University, Akita City, Akita 010-0195, Japan (Y.T., N.C., Y.N., N.F.);Division of Plant Sciences, National Institute of Agrobiological Sciences, Tsukuba 305-8602, Japan (Y.K.);Institute of Plant Science and Resources, Okayama University, Kurashiki 710-0046, Japan (R.M.);Department of General Education, Yamaguchi Prefectural University, Yamaguchi 753-8502, Japan (M.O.);Plant Genetic Resources, Institute of Genetic Resources, Faculty of Agriculture, Kyushu University, Fukuoka 812-8581, Japan (M.F., T.K.);RIKEN Center for Sustainable Resource Science, Tsurumi-ku, Yokohama 230-0045, Japan (Y.O., M.K., K.S., K.T., M.S.);Graduate School of Pharmaceutical Sciences, Chiba University, Chuo-ku, Chiba 260-8675, Japan (K.S.); andDepartment of Food Science and Human Nutrition, Iowa State University, Ames, Iowa 50011-1120 (Y.A., J.-L.J.).
Mayuko SatoDepartment of Biological Production, Akita Prefectural University, Akita City, Akita 010-0195, Japan (Y.T., N.C., Y.N., N.F.);Division of Plant Sciences, National Institute of Agrobiological Sciences, Tsukuba 305-8602, Japan (Y.K.);Institute of Plant Science and Resources, Okayama University, Kurashiki 710-0046, Japan (R.M.);Department of General Education, Yamaguchi Prefectural University, Yamaguchi 753-8502, Japan (M.O.);Plant Genetic Resources, Institute of Genetic Resources, Faculty of Agriculture, Kyushu University, Fukuoka 812-8581, Japan (M.F., T.K.);RIKEN Center for Sustainable Resource Science, Tsurumi-ku, Yokohama 230-0045, Japan (Y.O., M.K., K.S., K.T., M.S.);Graduate School of Pharmaceutical Sciences, Chiba University, Chuo-ku, Chiba 260-8675, Japan (K.S.); andDepartment of Food Science and Human Nutrition, Iowa State University, Ames, Iowa 50011-1120 (Y.A., J.-L.J.).
Yongfeng AiDepartment of Biological Production, Akita Prefectural University, Akita City, Akita 010-0195, Japan (Y.T., N.C., Y.N., N.F.);Division of Plant Sciences, National Institute of Agrobiological Sciences, Tsukuba 305-8602, Japan (Y.K.);Institute of Plant Science and Resources, Okayama University, Kurashiki 710-0046, Japan (R.M.);Department of General Education, Yamaguchi Prefectural University, Yamaguchi 753-8502, Japan (M.O.);Plant Genetic Resources, Institute of Genetic Resources, Faculty of Agriculture, Kyushu University, Fukuoka 812-8581, Japan (M.F., T.K.);RIKEN Center for Sustainable Resource Science, Tsurumi-ku, Yokohama 230-0045, Japan (Y.O., M.K., K.S., K.T., M.S.);Graduate School of Pharmaceutical Sciences, Chiba University, Chuo-ku, Chiba 260-8675, Japan (K.S.); andDepartment of Food Science and Human Nutrition, Iowa State University, Ames, Iowa 50011-1120 (Y.A., J.-L.J.).
Jay-Lin JaneDepartment of Biological Production, Akita Prefectural University, Akita City, Akita 010-0195, Japan (Y.T., N.C., Y.N., N.F.);Division of Plant Sciences, National Institute of Agrobiological Sciences, Tsukuba 305-8602, Japan (Y.K.);Institute of Plant Science and Resources, Okayama University, Kurashiki 710-0046, Japan (R.M.);Department of General Education, Yamaguchi Prefectural University, Yamaguchi 753-8502, Japan (M.O.);Plant Genetic Resources, Institute of Genetic Resources, Faculty of Agriculture, Kyushu University, Fukuoka 812-8581, Japan (M.F., T.K.);RIKEN Center for Sustainable Resource Science, Tsurumi-ku, Yokohama 230-0045, Japan (Y.O., M.K., K.S., K.T., M.S.);Graduate School of Pharmaceutical Sciences, Chiba University, Chuo-ku, Chiba 260-8675, Japan (K.S.); andDepartment of Food Science and Human Nutrition, Iowa State University, Ames, Iowa 50011-1120 (Y.A., J.-L.J.).ORCID http://orcid.org/0000-0002-7570-2774
Yasunori NakamuraDepartment of Biological Production, Akita Prefectural University, Akita City, Akita 010-0195, Japan (Y.T., N.C., Y.N., N.F.);Division of Plant Sciences, National Institute of Agrobiological Sciences, Tsukuba 305-8602, Japan (Y.K.);Institute of Plant Science and Resources, Okayama University, Kurashiki 710-0046, Japan (R.M.);Department of General Education, Yamaguchi Prefectural University, Yamaguchi 753-8502, Japan (M.O.);Plant Genetic Resources, Institute of Genetic Resources, Faculty of Agriculture, Kyushu University, Fukuoka 812-8581, Japan (M.F., T.K.);RIKEN Center for Sustainable Resource Science, Tsurumi-ku, Yokohama 230-0045, Japan (Y.O., M.K., K.S., K.T., M.S.);Graduate School of Pharmaceutical Sciences, Chiba University, Chuo-ku, Chiba 260-8675, Japan (K.S.); andDepartment of Food Science and Human Nutrition, Iowa State University, Ames, Iowa 50011-1120 (Y.A., J.-L.J.).ORCID http://orcid.org/0000-0001-7660-0078
Naoko FujitaDepartment of Biological Production, Akita Prefectural University, Akita City, Akita 010-0195, Japan (Y.T., N.C., Y.N., N.F.);Division of Plant Sciences, National Institute of Agrobiological Sciences, Tsukuba 305-8602, Japan (Y.K.);Institute of Plant Science and Resources, Okayama University, Kurashiki 710-0046, Japan (R.M.);Department of General Education, Yamaguchi Prefectural University, Yamaguchi 753-8502, Japan (M.O.);Plant Genetic Resources, Institute of Genetic Resources, Faculty of Agriculture, Kyushu University, Fukuoka 812-8581, Japan (M.F., T.K.);RIKEN Center for Sustainable Resource Science, Tsurumi-ku, Yokohama 230-0045, Japan (Y.O., M.K., K.S., K.T., M.S.);Graduate School of Pharmaceutical Sciences, Chiba University, Chuo-ku, Chiba 260-8675, Japan (K.S.); andDepartment of Food Science and Human Nutrition, Iowa State University, Ames, Iowa 50011-1120 (Y.A., J.-L.J.) naokof@akita-pu.ac.jp.
Akita Prefectural University · JPRIKEN Center for Sustainable Resource Science · JPIowa State University · USKyushu University · JPChiba University · JPInstitute of Agrobiological Sciences · JPOkayama University · JPYamaguchi Prefectural University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Starch granule morphology differs markedly among plant species. However, the mechanisms controlling starch granule morphology have not been elucidated. Rice (Oryza sativa) endosperm produces characteristic compound-type granules containing dozens of polyhedral starch granules within an amyloplast. Some other cereal species produce simple-type granules, in which only one starch granule is present per amyloplast. A double mutant rice deficient in the starch synthase (SS) genes SSIIIa and SSIVb (ss3a ss4b) produced spherical starch granules, whereas the parental single mutants produced polyhedral starch granules similar to the wild type. The ss3a ss4b amyloplasts contained compound-type starch granules during early developmental stages, and spherical granules were separated from each other during subsequent amyloplast development and seed dehydration. Analysis of glucan chain length distribution identified overlapping roles for SSIIIa and SSIVb in amylopectin chain synthesis, with a degree of polymerization of 42 or greater. Confocal fluorescence microscopy and immunoelectron microscopy of wild-type developing rice seeds revealed that the majority of SSIVb was localized between starch granules. Therefore, we propose that SSIIIa and SSIVb have crucial roles in determining starch granule morphology and in maintaining the amyloplast envelope structure. We present a model of spherical starch granule production.

Indexed as

DNA, PlantEndospermLipid MetabolismMicroscopy, Electron, ScanningMicroscopy, Electron, TransmissionMutationOryzaPhylogenyPlant ProteinsPlants, Genetically ModifiedPlastidsRecombinant ProteinsStarchStarch SynthaseDNA, PlantPlant ProteinsRecombinant ProteinsStarchStarch Synthase

Identifiers

PMID26747287
PMCPMC4775109
OpenAlexW2239307992

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