Evidence map›Paper›PMID 26747130›Full record

ArticleJournal of plant research2016

Over-expression of Arabidopsis thaliana SFD1/GLY1, the gene encoding plastid localized glycerol-3-phosphate dehydrogenase, increases plastidic lipid content in transgenic rice plants.

Vijayata Singh, Praveen Kumar Singh, Adnan Siddiqui, Subaran Singh, Zeeshan Zahoor Banday, Ashis Kumar Nandi

Abstract read
In one paragraph

Article in Journal of plant research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.7field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 21 citations in OpenAlex.

  1. Review
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  6. A cytosolic NADBMC plant biology · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Vijayata Singh *School of Life Sciences, Jawaharlal Nehru University, 415, New Delhi 110067, India.
Praveen Kumar Singh *School of Life Sciences, Jawaharlal Nehru University, 415, New Delhi 110067, India.
Adnan SiddiquiSchool of Life Sciences, Jawaharlal Nehru University, 415, New Delhi 110067, India.
Subaran SinghSchool of Life Sciences, Jawaharlal Nehru University, 415, New Delhi 110067, India.
Zeeshan Zahoor BandaySchool of Life Sciences, Jawaharlal Nehru University, 415, New Delhi 110067, India.
Ashis Kumar NandiSchool of Life Sciences, Jawaharlal Nehru University, 415, New Delhi 110067, India.
Jawaharlal Nehru University · IN

Funding

Mentoring CoreP20GM103418 · NIGMS · UNIVERSITY OF KANSAS MEDICAL CENTER · PI SUSAN J. BROWN · 2012 to 2026
$63.0M
NIGMS NIH HHS P20 GM103418
6 · The paper itself

Abstract

Lipids are the major constituents of all membranous structures in plants. Plants possess two pathways for lipid biosynthesis: the prokaryotic pathway (i.e., plastidic pathway) and the eukaryotic pathway (i.e., endoplasmic-reticulum (ER) pathway). Whereas some plants synthesize galactolipids from diacylglycerol assembled in the plastid, others, including rice, derive their galactolipids from diacylglycerols assembled by the eukaryotic pathway. Arabidopsis thaliana glycerol-3-phosphate dehydrogenase (G3pDH), coded by SUPPRESSOR OF FATTY ACID DESATURASE 1 (SFD1; alias GLY1) gene, catalyzes the formation of glycerol 3-phosphate (G3p), the backbone of many membrane lipids. Here SFD1 was introduced to rice as a transgene. Arabidopsis SFD1 localizes in rice plastids and its over-expression increases plastidic membrane lipid content in transgenic rice plants without any major impact on ER lipids. The results suggest that over-expression of plastidic G3pDH enhances biosynthesis of plastid-localized lipids in rice. Lipid composition in the transgenic plants is consistent with increased phosphatidylglycerol synthesis in the plastid and increased galactolipid synthesis from diacylglycerol produced via the ER pathway. The transgenic plants show a higher photosynthetic assimilation rate, suggesting a possible application of this finding in crop improvement.

Indexed as

ArabidopsisArabidopsis ProteinsFatty AcidsGalactolipidsGene ExpressionGene Expression Regulation, PlantGenes, ReporterGlycerolphosphate DehydrogenaseGlycerophosphatesLipid MetabolismLipidsOryzaPhotosynthesisPlants, Genetically ModifiedPlastidsRecombinant Fusion Proteinsalpha-glycerophosphoric acidArabidopsis ProteinsFatty AcidsGalactolipidsGlycerolphosphate DehydrogenaseGlycerophosphatesLipidsRecombinant Fusion ProteinsSFD1 protein, ArabidopsisArabidopsisESI–MS/MSG3pDHLipidsSFD1Transgenic rice

Identifiers

PMID26747130
PMCPMC5077251
OpenAlexW2234392176

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.