ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2016
Genomic selection in a commercial winter wheat population.
Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 87 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
87 citing papers in PubMed.
- Integrating Epistatic Interactions into Genomic Prediction of Growth and Fillet Fat Content in Common Carp.International journal of molecular sciences · 2026Article
- Genetic characteristics and agronomic traits in leafy head Chinese cabbage breeding.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026Article
- A breeding strategy for high-oleic acid content and high-yield peanut using Tag SNPs and genomic selection.BMC plant biology · 2026Article
- Integrating genomic predictions into an applied Central European wheat breeding program.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026Article
- Derivation of prediction error variance for non-genotyped individuals in genomic selection.Frontiers in genetics · 2026Article
- Optimizing phenotypic data analysis strategies to enhance genomic prediction in winter wheat breeding.Frontiers in plant science · 2026Article
- Genome Selection for Fleece Traits in Inner Mongolia Cashmere Goats Based on GWAS Prior Marker Information.Animals : an open access journal from MDPI · 2025Article
- Harnessing historical genebank data to accelerate pea breeding.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025Article
- Improving genomic selection in hexaploid wheat with sub-genome additive and epistatic models.G3 (Bethesda, Md.) · 2025Article
- Improving wheat grain yield genomic prediction accuracy using historical data.G3 (Bethesda, Md.) · 2025Article
- Can the molecular and transgenic breeding of crops be an alternative and sustainable technology to meet food demand?Functional & integrative genomics · 2025Review
- Optimization of sparse phenotyping strategy in multi-environmental trials in maize.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025Article
- Genomic selection and genetic architecture of agronomic traits during modern flowering Chinese cabbage breeding.Horticulture research · 2025Article
- Source-sink synergy is the key unlocking sweet potato starch yield potential.Nature communications · 2024Article
- Performance of phenomic selection in rice: Effects of population size and genotype-environment interactions on predictive ability.PloS one · 2024Article
- Utilization of a publicly available diversity panel in genomic prediction of Fusarium head blight resistance traits in wheat.The plant genome · 2023Article
- Genomics for Yield and Yield Components in Durum Wheat.Plants (Basel, Switzerland) · 2023Review
- Sparse Phenotyping and Haplotype-Based Models for Genomic Prediction in Rice.Rice (New York, N.Y.) · 2023Article
- Genomic selection for agronomic traits in a winter wheat breeding program.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023Article
- Phenomic and genomic prediction of yield on multiple locations in winter wheat.Frontiers in genetics · 2023Article
27 more citing papers are in PubMed but not listed here.
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
9 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
key messageGenomic selection models can be trained using historical data and filtering genotypes based on phenotyping intensity and reliability criterion are able to increase the prediction ability. We implemented genomic selection based on a large commercial population incorporating 2325 European winter wheat lines. Our objectives were (1) to study whether modeling epistasis besides additive genetic effects results in enhancement on prediction ability of genomic selection, (2) to assess prediction ability when training population comprised historical or less-intensively phenotyped lines, and (3) to explore the prediction ability in subpopulations selected based on the reliability criterion. We found a 5 % increase in prediction ability when shifting from additive to additive plus epistatic effects models. In addition, only a marginal loss from 0.65 to 0.50 in accuracy was observed using the data collected from 1 year to predict genotypes of the following year, revealing that stable genomic selection models can be accurately calibrated to predict subsequent breeding stages. Moreover, prediction ability was maximized when the genotypes evaluated in a single location were excluded from the training set but subsequently decreased again when the phenotyping intensity was increased above two locations, suggesting that the update of the training population should be performed considering all the selected genotypes but excluding those evaluated in a single location. The genomic prediction ability was substantially higher in subpopulations selected based on the reliability criterion, indicating that phenotypic selection for highly reliable individuals could be directly replaced by applying genomic selection to them. We empirically conclude that there is a high potential to assist commercial wheat breeding programs employing genomic selection approaches.
Indexed as
Identifiers
26747048What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.