Evidence map›Paper›PMID 26746851›Full record

ArticleThe EMBO journal2016

HDAC6 regulates cellular viral RNA sensing by deacetylation of RIG-I.

Su Jin Choi, Hyun-Cheol Lee, Jae-Hoon Kim, Song Yi Park, Tae-Hwan Kim, Woon-Kyu Lee, Duk-Jae Jang, Ji-Eun Yoon, Young-Il Choi, Seihwan Kim and 6 more

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 89 papers.

0numbers the graph read from it
0cells of the map it votes in
89citing papers in PubMed
6.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

89 citing papers in PubMed, 119 citations in OpenAlex.

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  11. Investigation of Protein Lysine Acetylation in Antiviral Innate Immunity.Methods in molecular biology (Clifton, N.J.) · 2025
    Article
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29 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 7 institutions in 2 countries.

Su Jin ChoiGraduate School of Analytical Science and Technology (GRAST), Chungnam National University, Daejeon, Korea.
Hyun-Cheol LeeCollege of Veterinary Medicine (BK21 Plus Program), Chungnam National University, Daejeon, Korea.
Jae-Hoon KimCollege of Veterinary Medicine (BK21 Plus Program), Chungnam National University, Daejeon, Korea.
Song Yi ParkGraduate School of Analytical Science and Technology (GRAST), Chungnam National University, Daejeon, Korea.
Tae-Hwan KimCollege of Veterinary Medicine (BK21 Plus Program), Chungnam National University, Daejeon, Korea.
Woon-Kyu LeeCollege of Medicine, Inha University, Incheon, Korea.
Duk-Jae JangCollege of Veterinary Medicine (BK21 Plus Program), Chungnam National University, Daejeon, Korea.
Ji-Eun YoonFoot and Mouth Disease Division, Animal Quarantine and Inspection Agency, Anyang, Korea.
Young-Il ChoiCKD Research Institute, Yongin-si Gyeonggi-do, Korea.
Seihwan KimCKD Research Institute, Yongin-si Gyeonggi-do, Korea.
JinYeul MaKorean Medicine (KM) Based Herbal Drug Development Group, Korea Institute of Oriental Medicine, Daejeon, Korea.
Chul-Joong KimCollege of Veterinary Medicine (BK21 Plus Program), Chungnam National University, Daejeon, Korea.
Tso-Pang YaoDepartment of Pharmacology and Cancer Biology, Duke University, Durham, NC, USA.
Jae U JungDepartment of Molecular Microbiology and Immunology, Keck School of Medicine, University of Southern California, Los Angeles, CA, USA.
Joo-Yong LeeGraduate School of Analytical Science and Technology (GRAST), Chungnam National University, Daejeon, Korea leejooyong@cnu.ac.kr jongsool@cnu.ac.kr.
Jong-Soo LeeCollege of Veterinary Medicine (BK21 Plus Program), Chungnam National University, Daejeon, Korea leejooyong@cnu.ac.kr jongsool@cnu.ac.kr.
Chungnam National University · KRKorea Medicine Research Institute · KRAnimal and Plant Quarantine Agency · KRDuke University · USInha University · KRKorea Institute of Oriental Medicine · KRUniversity of Southern California · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

RIG-I is a key cytosolic sensor that detects RNA viruses through its C-terminal region and activates the production of antiviral interferons (IFNs) and proinflammatory cytokines. While posttranslational modification has been demonstrated to regulate RIG-I signaling activity, its significance for the sensing of viral RNAs remains unclear. Here, we first show that the RIG-I C-terminal region undergoes deacetylation to regulate its viral RNA-sensing activity and that the HDAC6-mediated deacetylation of RIG-I is critical for viral RNA detection. HDAC6 transiently bound to RIG-I and removed the lysine 909 acetylation in the presence of viral RNAs, promoting RIG-I sensing of viral RNAs. Depletion of HDAC6 expression led to impaired antiviral responses against RNA viruses, but not against DNA viruses. Consequently, HDAC6 knockout mice were highly susceptible to RNA virus infections compared to wild-type mice. These findings underscore the critical role of HDAC6 in the modulation of the RIG-I-mediated antiviral sensing pathway.

Indexed as

Protein Processing, Post-TranslationalAnimalsCell LineDEAD Box Protein 58DEAD-box RNA HelicasesDisease Models, AnimalGenetic Predisposition to DiseaseHistone Deacetylase 6Histone DeacetylasesHumansMice, KnockoutReceptors, ImmunologicRNA, ViralRNA Virus InfectionsDEAD Box Protein 58DEAD-box RNA HelicasesHDAC6 protein, humanHdac6 protein, mouseHistone Deacetylase 6Histone DeacetylasesReceptors, ImmunologicRIGI protein, humanRNA, ViraldeacetylationHDAC6innate immunityRIG‐Ivirus sensing

Identifiers

PMID26746851
PMCPMC4755110
OpenAlexW2227424556

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.