Evidence map›Paper›PMID 26744829›Full record

ArticleEpidemiology and infection2016

Multilocus sequence typing of 102 Burkholderia pseudomallei strains isolated from China.

Y Fang, P Zhu, Q Li, H Chen, Y Li, C Ren, Y Hu, Z Tan, J Gu, X Mao

Abstract read
In one paragraph

Article in Epidemiology and infection, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. Article
  3. The Genomic Epidemiology of ClinicalPathogens (Basel, Switzerland) · 2024
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Observational
  9. Endemic Melioidosis in Southern China: Past and Present.Tropical medicine and infectious disease · 2019
    Review
  10. Article
  11. Multidrug-resistantZhong nan da xue xue bao. Yi xue ban = Journal of Central South University. Medical sciences
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Y FangDepartment of Clinical Microbiology and Immunology of Southwest Hospital & the College of Medical Laboratory Science,Department of Microbiology and Biochemical Pharmacy of the College of Pharmacy,and the National Engineering Research Centre for Immunobiological Products,Third Military Medical University,Chongqing,People's Republic of China.
P ZhuDepartment of Clinical Microbiology and Immunology of Southwest Hospital & the College of Medical Laboratory Science,Department of Microbiology and Biochemical Pharmacy of the College of Pharmacy,and the National Engineering Research Centre for Immunobiological Products,Third Military Medical University,Chongqing,People's Republic of China.
Q LiDepartment of Clinical Microbiology and Immunology of Southwest Hospital & the College of Medical Laboratory Science,Department of Microbiology and Biochemical Pharmacy of the College of Pharmacy,and the National Engineering Research Centre for Immunobiological Products,Third Military Medical University,Chongqing,People's Republic of China.
H ChenDepartment of Clinical Laboratory,People's Hospital of Sanya City,Hainan Province,People's Republic of China.
Y LiDepartment of Clinical Laboratory,People's Hospital of Sanya City,Hainan Province,People's Republic of China.
C RenDepartment of Clinical Microbiology and Immunology of Southwest Hospital & the College of Medical Laboratory Science,Department of Microbiology and Biochemical Pharmacy of the College of Pharmacy,and the National Engineering Research Centre for Immunobiological Products,Third Military Medical University,Chongqing,People's Republic of China.
Y HuDepartment of Clinical Microbiology and Immunology of Southwest Hospital & the College of Medical Laboratory Science,Department of Microbiology and Biochemical Pharmacy of the College of Pharmacy,and the National Engineering Research Centre for Immunobiological Products,Third Military Medical University,Chongqing,People's Republic of China.
Z TanKey Laboratory of Enteric Pathogenic Microbiology, Ministry of Health,Jiangsu Provincial Centre for Disease Control and Prevention,Nanjing,People's Republic of China.
J GuDepartment of Clinical Microbiology and Immunology of Southwest Hospital & the College of Medical Laboratory Science,Department of Microbiology and Biochemical Pharmacy of the College of Pharmacy,and the National Engineering Research Centre for Immunobiological Products,Third Military Medical University,Chongqing,People's Republic of China.
X MaoDepartment of Clinical Microbiology and Immunology of Southwest Hospital & the College of Medical Laboratory Science,Department of Microbiology and Biochemical Pharmacy of the College of Pharmacy,and the National Engineering Research Centre for Immunobiological Products,Third Military Medical University,Chongqing,People's Republic of China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The phylogenetic and epidemiological relationships of 102 Burkholderia pseudomallei clinical isolates from different geographical and population sources in China were investigated by multilocus sequence typing (MLST). The MLST data were analysed using the e-BURST algorithm, and an unweighted pair-group method with arithmetic mean dendrogram was constructed based on the pair-wise differences in the allelic profiles of the strains. Forty-one sequence types (STs) were identified, of which eight were novel (ST1341, ST1345, ST1346, ST1347, ST1348, ST1349, ST1350, ST1351). No geographical-specific or host population-specific phylogenetic lineages were identified. ST46, ST50, ST55, ST58, ST70 and ST1095 predominated, but ~44% of isolates were assigned to 45 STs illustrating high genetic diversity in the strain collection. Additionally, the phylogenetic relationships of the dominant STs in China showed significant linkeage with B. pseudomallei isolates from Thailand. Analysis of the gmhD allele suggests high genetic variation in B. pseudomallei in China.

Indexed as

Bacterial Typing TechniquesMultilocus Sequence TypingAgedAged, 80 and overBurkholderia pseudomalleiChildChild, PreschoolChinaFemaleGenetic VariationGenotypeHumansInfantMaleMelioidosisMiddle AgedBurkholderia pseudomalleie-BURSTmultilocus sequence typing (MLST)

Identifiers

PMID26744829
PMCPMC9150655

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.