Evidence map›Paper›PMID 26744768›Full record

ArticleBiochemistry2016

Mechanism of the Flavoprotein L-Hydroxynicotine Oxidase: Kinetic Mechanism, Substrate Specificity, Reaction Product, and Roles of Active-Site Residues.

Paul F Fitzpatrick, Fatemeh Chadegani, Shengnan Zhang, Kenneth M Roberts, Cynthia S Hinck

Open access · greenAbstract read
In one paragraph

Article in Biochemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 1 pooled it
2.0field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 1 synthesis or guideline pooled it, 22 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. The enzymes of microbial nicotine metabolism.Beilstein journal of organic chemistry · 2018
    Review
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Paul F FitzpatrickDepartment of Biochemistry, University of Texas Health Science Center at San Antonio , San Antonio, Texas 78229, United States.
Fatemeh ChadeganiDepartment of Biochemistry, University of Texas Health Science Center at San Antonio , San Antonio, Texas 78229, United States.
Shengnan ZhangDepartment of Biochemistry, University of Texas Health Science Center at San Antonio , San Antonio, Texas 78229, United States.
Kenneth M RobertsDepartment of Chemistry & Physics, University of South Carolina Aiken , Aiken, South Carolina 29801, United States.
Cynthia S HinckDepartment of Biochemistry, University of Texas Health Science Center at San Antonio , San Antonio, Texas 78229, United States.
The University of Texas Health Science Center at San Antonio · USUniversity of South Carolina Aiken · US

Funding

TISSUE CULTURE---COREP30CA054174 · NCI · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI Lei Zheng · 1991 to 2026
$59.1M
Mechanisms of FlavoproteinsR01GM058698 · NIGMS · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI FITZPATRICK, PAUL F. · 1999 to 2017
$4.6M
NCI NIH HHS P30 CA054174NCI NIH HHS P30 NCI/CA054174NIGMS NIH HHS R01 GM058698
6 · The paper itself

Abstract

The flavoprotein L-hydroxynicotine oxidase (LHNO) catalyzes an early step in the bacterial catabolism of nicotine. Although the structure of the enzyme establishes that it is a member of the monoamine oxidase family, LHNO is generally accepted to oxidize a carbon-carbon bond in the pyrrolidine ring of the substrate and has been proposed to catalyze the subsequent tautomerization and hydrolysis of the initial oxidation product to yield 6-hydroxypseudooxynicotine [Kachalova, G., et al. (2011) Proc. Natl. Acad. Sci. U.S.A. 108, 4800-4805]. Analysis of the product of the enzyme from Arthrobacter nicotinovorans by nuclear magnetic resonance and continuous-flow mass spectrometry establishes that the enzyme catalyzes the oxidation of the pyrrolidine carbon-nitrogen bond, the expected reaction for a monoamine oxidase, and that hydrolysis of the amine to form 6-hydroxypseudooxynicotine is nonenzymatic. On the basis of the kcat/Km and kred values for (S)-hydroxynicotine and several analogues, the methyl group contributes only marginally (∼ 0.5 kcal/mol) to transition-state stabilization, while the hydroxyl oxygen and pyridyl nitrogen each contribute ∼ 4 kcal/mol. The small effects on activity of mutagenesis of His187, Glu300, or Tyr407 rule out catalytic roles for all three of these active-site residues.

Indexed as

ArthrobacterBacterial ProteinsCatalysisCatalytic DomainKineticsMonoamine OxidaseOxidation-ReductionSubstrate SpecificityBacterial ProteinsMonoamine Oxidase

Identifiers

PMID26744768
PMCPMC4738163
OpenAlexW2231935909

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.