Evidence map›Paper›PMID 26744459›Full record

ArticleBlood2016

Mutations in AP3D1 associated with immunodeficiency and seizures define a new type of Hermansky-Pudlak syndrome.

Sandra Ammann, Ansgar Schulz, Ingeborg Krägeloh-Mann, Nele M G Dieckmann, Klaus Niethammer, Sebastian Fuchs, Katja Martina Eckl, Roswitha Plank, Roland Werner, Janine Altmüller and 11 more

Open access · bronzeAbstract readCase Reports
In one paragraph

Article in Blood, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 86 papers.

0numbers the graph read from it
0cells of the map it votes in
86citing papers in PubMed
13.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

86 citing papers in PubMed, 175 citations in OpenAlex.

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26 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

21 authors at 8 institutions in 2 countries.

Sandra AmmannCenter for Chronic Immunodeficiency, University Medical Center Freiburg, Freiburg, Germany; Faculty of Biology, University Freiburg, Freiburg, Germany;
Ansgar SchulzDepartment of Pediatrics, University Medical Center Ulm, Ulm, Germany;
Ingeborg Krägeloh-MannDepartment of Pediatrics, University Medical Center Tübingen, Tübingen, Germany;
Nele M G DieckmannCambridge Institute for Medical Research, Biomedical Campus, Cambridge, United Kingdom;
Klaus NiethammerDepartment of Pediatrics, University Medical Center Esslingen, Esslingen, Germany;
Sebastian FuchsCenter for Chronic Immunodeficiency, University Medical Center Freiburg, Freiburg, Germany;
Katja Martina EcklCologne Center for Genomics, University of Cologne, Cologne, Germany; Division of Human Genetics, Medical University of Innsbruck, Innsbruck, Austria;
Roswitha PlankCologne Center for Genomics, University of Cologne, Cologne, Germany; Division of Human Genetics, Medical University of Innsbruck, Innsbruck, Austria;
Roland WernerDivision of Human Genetics, Medical University of Innsbruck, Innsbruck, Austria;
Janine AltmüllerCologne Center for Genomics, University of Cologne, Cologne, Germany;
Holger ThieleCologne Center for Genomics, University of Cologne, Cologne, Germany;
Peter NürnbergCologne Center for Genomics, University of Cologne, Cologne, Germany; Cologne Excellence Cluster on Cellular Stress Responses in Aging-Associated Diseases, University of Cologne, Cologne, Germany;
Julia BankCenter for Chronic Immunodeficiency, University Medical Center Freiburg, Freiburg, Germany;
Anne StraussDepartment of Pediatrics, University Medical Center Ulm, Ulm, Germany;
Horst von BernuthDepartment of Pediatrics, University Medical Center Charité Berlin, Berlin, Germany; Immunology, Berlin Laboratory, Charité Berlin Vivantes GmbH, Berlin, Germany;
Udo Zur StadtCenter for Diagnostics and.
Samantha GrieveCambridge Institute for Medical Research, Biomedical Campus, Cambridge, United Kingdom;
Gillian M GriffithsCambridge Institute for Medical Research, Biomedical Campus, Cambridge, United Kingdom;
Kai LehmbergPediatric Hematology and Oncology, University Medical Center Hamburg-Eppendorf, Hamburg, Germany; and.
Hans Christian HenniesCologne Center for Genomics, University of Cologne, Cologne, Germany; Division of Human Genetics, Medical University of Innsbruck, Innsbruck, Austria; Cologne Excellence Cluster on Cellular Stress Responses in Aging-Associated Diseases, University of Cologne, Cologne, Germany;
Stephan EhlCenter for Chronic Immunodeficiency, University Medical Center Freiburg, Freiburg, Germany; Center for Pediatrics and Adolescent Medicine, University Medical Center, Freiburg, Germany.ORCID http://orcid.org/0000-0002-9265-2721
Innsbruck Medical University · ATUniversity Medical Center Freiburg · DEUniversity of Cologne · DECS Diagnostics · DEUniversität Hamburg · DEUniversity of Freiburg · DEUniversity of Tübingen · DEVivantes Klinikum · DE

Funding

Wellcome Trust 100140Wellcome Trust 103930
6 · The paper itself

Abstract

Genetic disorders affecting biogenesis and transport of lysosome-related organelles are heterogeneous diseases frequently associated with albinism. We studied a patient with albinism, neutropenia, immunodeficiency, neurodevelopmental delay, generalized seizures, and impaired hearing but with no mutation in genes so far associated with albinism and immunodeficiency. Whole exome sequencing identified a homozygous mutation in AP3D1 that leads to destabilization of the adaptor protein 3 (AP3) complex. AP3 complex formation and the degranulation defect in patient T cells were restored by retroviral reconstitution. A previously described hypopigmented mouse mutant with an Ap3d1 null mutation (mocha strain) shares the neurologic phenotype with our patient and shows a platelet storage pool deficiency characteristic of Hermansky-Pudlak syndrome (HPS) that was not studied in our patient because of a lack of bleeding. HPS2 caused by mutations in AP3B1A leads to a highly overlapping phenotype without the neurologic symptoms. The AP3 complex exists in a ubiquitous and a neuronal form. AP3D1 codes for the AP3δ subunit of the complex, which is essential for both forms. In contrast, the AP3β3A subunit, affected in HPS2 patients, is substituted by AP3β3B in the neuron-specific heterotetramer. AP3δ deficiency thus causes a severe neurologic disorder with immunodeficiency and albinism that we propose to classify as HPS10.

Indexed as

Adaptor Protein Complex 3Adaptor Protein Complex delta SubunitsElectrophoresis, Polyacrylamide GelFluorescent Antibody TechniqueHermanski-Pudlak SyndromeHumansImmunologic Deficiency SyndromesMutationSeizuresTransfectionAdaptor Protein Complex 3Adaptor Protein Complex delta SubunitsAP3D1 protein, human

Identifiers

PMID26744459
PMCPMC7611501
OpenAlexW2411673953

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.