Evidence map›Paper›PMID 26744403›Full record

ArticleScience (New York, N.Y.)2016

The 5300-year-old Helicobacter pylori genome of the Iceman.

Frank Maixner, Ben Krause-Kyora, Dmitrij Turaev, Alexander Herbig, Michael R Hoopmann, Janice L Hallows, Ulrike Kusebauch, Eduard Egarter Vigl, Peter Malfertheiner, Francis Megraud and 13 more

Abstract read
In one paragraph

Article in Science (New York, N.Y.), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 103 papers.

0numbers the graph read from it
0cells of the map it votes in
103citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

103 citing papers in PubMed.

  1. Microbiology and molecular biology reviews : MMBR · 2026
    Review
  2. Article
  3. Review
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  14. Review
  15. Article
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  18. Trained Immunity and Trained Tolerance: The Case ofInternational journal of molecular sciences · 2024
    Review
  19. Article
  20. Frontiers in immunology · 2024
    Review

43 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors.

Frank Maixner *Institute for Mummies and the Iceman, EURAC research, Viale Druso 1, 39100 Bolzano, Italy.
Ben Krause-Kyora *Institute of Clinical Molecular Biology, Kiel University, Schittenhelmstr. 12, 24105 Kiel, Germany.
Dmitrij Turaev *CUBE - Division of Computational Systems Biology, Department of Microbiology and Ecosystem Science, University of Vienna, Althanstr. 14, 1090 Vienna, Austria.
Alexander Herbig *Institute for Archaeological Sciences, University of Tübingen, Rümelinstr. 23, 72072 Tübingen, Germany.
Michael R HoopmannInstitute for Systems Biology, 401 Terry Avenue North, Seattle, Washington 98109, USA.
Janice L HallowsInstitute for Systems Biology, 401 Terry Avenue North, Seattle, Washington 98109, USA.
Ulrike KusebauchInstitute for Systems Biology, 401 Terry Avenue North, Seattle, Washington 98109, USA.
Eduard Egarter ViglScuola Superiore Sanitaria Provinciale "Claudiana", Via Lorenz Böhler 13, 39100 Bolzano, Italy.
Peter MalfertheinerDepartment of Gastroenterology, Hepatology, and Infectious Diseases, Otto-von-Guericke University, Leipziger Strasse 44, 39120 Magdeburg, Germany.
Francis MegraudUniversité de Bordeaux, Centre National de Référence des Helicobacters et Campylobacters and INSERM U853, 146 rue Léo Saignat, 33076 Bordeaux, France.
Niall O'SullivanInstitute for Mummies and the Iceman, EURAC research, Viale Druso 1, 39100 Bolzano, Italy.
Giovanna CipolliniInstitute for Mummies and the Iceman, EURAC research, Viale Druso 1, 39100 Bolzano, Italy.
Valentina CoiaInstitute for Mummies and the Iceman, EURAC research, Viale Druso 1, 39100 Bolzano, Italy.
Marco SamadelliInstitute for Mummies and the Iceman, EURAC research, Viale Druso 1, 39100 Bolzano, Italy.
Lars EngstrandDepartment of Microbiology, Tumor and Cell Biology, Karolinska Institutet, 141 83 Stockholm, Sweden.
Bodo LinzDepartment of Veterinary and Biomedical Sciences, Pennsylvania State University, University Park, Pennsylvania 16802, USA.
Robert L MoritzInstitute for Systems Biology, 401 Terry Avenue North, Seattle, Washington 98109, USA.
Rudolf GrimmRobert Mondavi Institute for Food Science, University of California, Davis, California 95616, USA.
Johannes KrauseInstitute for Archaeological Sciences, University of Tübingen, Rümelinstr. 23, 72072 Tübingen, Germany.
Almut NebelInstitute of Clinical Molecular Biology, Kiel University, Schittenhelmstr. 12, 24105 Kiel, Germany.
Yoshan MoodleyDepartment of Zoology, University of Venda, Private Bag X5050, Thohoyandou 0950, Republic of South Africa.
Thomas RatteiCUBE - Division of Computational Systems Biology, Department of Microbiology and Ecosystem Science, University of Vienna, Althanstr. 14, 1090 Vienna, Austria.
Albert ZinkInstitute for Mummies and the Iceman, EURAC research, Viale Druso 1, 39100 Bolzano, Italy.

Funding

Quantitative Systems BiologyP50GM076547 · NIGMS · INSTITUTE FOR SYSTEMS BIOLOGY · PI DUDLEY, AIMEE M · 2006 to 2016
$30.6M
Shortening the development cycle time of Trans Proteomic Pipeline tools with high performance computingR01GM087221 · NIGMS · INSTITUTE FOR SYSTEMS BIOLOGY · PI DEUTSCH, ERIC, MORITZ, ROBERT L · 2010 to 2021
$6.0M
FAIMS-Selected Reaction Monitoring to Quantitative Protein Networks in DiseaseS10RR027584 · NCRR · INSTITUTE FOR SYSTEMS BIOLOGY · PI MORITZ, ROBERT L · 2011 to 2011
$576k
NCRR NIH HHS S10 RR027584NIGMS NIH HHS 2P50 GM076547NIGMS NIH HHS P50 GM076547NIGMS NIH HHS R01 GM087221
6 · The paper itself

Abstract

The stomach bacterium Helicobacter pylori is one of the most prevalent human pathogens. It has dispersed globally with its human host, resulting in a distinct phylogeographic pattern that can be used to reconstruct both recent and ancient human migrations. The extant European population of H. pylori is known to be a hybrid between Asian and African bacteria, but there exist different hypotheses about when and where the hybridization took place, reflecting the complex demographic history of Europeans. Here, we present a 5300-year-old H. pylori genome from a European Copper Age glacier mummy. The "Iceman" H. pylori is a nearly pure representative of the bacterial population of Asian origin that existed in Europe before hybridization, suggesting that the African population arrived in Europe within the past few thousand years.

Indexed as

Hybridization, GeneticAsiaChromosome MappingDNA, BacterialEuropeGenome, BacterialHelicobacter InfectionsHelicobacter pyloriHuman MigrationHumansIce CoverMummiesPhylogenyPhylogeographySequence Analysis, DNAStomachDNA, Bacterial

Identifiers

PMID26744403
PMCPMC4775254

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.