Evidence map›Paper›PMID 26743462›Full record

ArticleScientific reports2016

Gene targets of mouse miR-709: regulation of distinct pools.

Sneha Surendran, Victoria N Jideonwo, Chris Merchun, Miwon Ahn, John Murray, Jennifer Ryan, Kenneth W Dunn, Janaiah Kota, Núria Morral

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.3field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Review
  3. CorticalProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  4. Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Review
  10. MicroRNA-709 Mediates Acute Tubular Injury through Effects on Mitochondrial Function.Journal of the American Society of Nephrology : JASN · 2018
    Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Sneha SurendranDepartment of Medical and Molecular Genetics, Indiana University School of Medicine, Indianapolis, Indiana, United States of America.
Victoria N JideonwoDepartment of Medical and Molecular Genetics, Indiana University School of Medicine, Indianapolis, Indiana, United States of America.
Chris MerchunDepartment of Medical and Molecular Genetics, Indiana University School of Medicine, Indianapolis, Indiana, United States of America.
Miwon AhnDepartment of Medical and Molecular Genetics, Indiana University School of Medicine, Indianapolis, Indiana, United States of America.
John MurrayDepartment of Medical and Molecular Genetics, Indiana University School of Medicine, Indianapolis, Indiana, United States of America.
Jennifer RyanDivision of Nephrology, Department of Medicine, Indiana University School of Medicine, Indianapolis, Indiana, United States of America.
Kenneth W DunnDivision of Nephrology, Department of Medicine, Indiana University School of Medicine, Indianapolis, Indiana, United States of America.
Janaiah KotaDepartment of Medical and Molecular Genetics, Indiana University School of Medicine, Indianapolis, Indiana, United States of America.
Núria MorralDepartment of Medical and Molecular Genetics, Indiana University School of Medicine, Indianapolis, Indiana, United States of America.
Indiana University – Purdue University Indianapolis · USIndiana University School of Medicine

Funding

Translation CoreP30DK097512 · NIDDK · INDIANA UNIVERSITY INDIANAPOLIS · PI AMBER L. MOSLEY · 2015 to 2026
$17.4M
EXTRAMURAL RESEARCH FACILITIES IMPROVEMENT: NEUROLOGICAL DISORDERS:ALZ, PDC06RR020128 · NCRR · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI FIFE, ROSE S · 2004 to 2004
$3.7M
Short-Term Training Program In Biomedical SciencesT35HL110854 · NHLBI · INDIANA UNIVERSITY INDIANAPOLIS · PI Brittney-Shea Herbert, Catherine Rufatto Sears · 2012 to 2026
$3.4M
Hepatic expression of small hairpin RNA using gutless adenoviral vectorsR01DK078595 · NIDDK · INDIANA UNIVERSITY INDIANAPOLIS · PI MORRAL, NURIA · 2008 to 2012
$1.6M
NCRR NIH HHS C06 RR020128NCRR NIH HHS C06 RR020128-01NHLBI NIH HHS T35 HL110854NHLBI NIH HHS T35-HL110854-01NIDDK NIH HHS P30 DK097512NIDDK NIH HHS R01 DK078595NIDDK NIH HHS R01DK078595NIDDK NIH HHS R01DK078595-05S1
6 · The paper itself

Abstract

MicroRNA (miRNA) are short non-coding RNA molecules that regulate multiple cellular processes, including development, cell differentiation, proliferation and death. Nevertheless, little is known on whether miRNA control the same gene networks in different tissues. miR-709 is an abundant miRNA expressed ubiquitously. Through transcriptome analysis, we have identified targets of miR-709 in hepatocytes. miR-709 represses genes implicated in cytoskeleton organization, extracellular matrix attachment, and fatty acid metabolism. Remarkably, none of the previously identified targets in non-hepatic tissues are silenced by miR-709 in hepatocytes, even though several of these genes are abundantly expressed in liver. In addition, miR-709 is upregulated in hepatocellular carcinoma, suggesting it participates in the genetic reprogramming that takes place during cell division, when cytoskeleton remodeling requires substantial changes in gene expression. In summary, the present study shows that miR-709 does not repress the same pool of genes in separate cell types. These results underscore the need for validating gene targets in every tissue a miRNA is expressed.

Indexed as

Gene Regulatory NetworksTranscriptomeAnimalsBase SequenceCarcinoma, HepatocellularCytoskeletal ProteinsDisease Models, AnimalExtracellular Matrix ProteinsGene Expression ProfilingGene Expression RegulationGenes, ReporterHepatocytesHumansLipid MetabolismLiver NeoplasmsLuciferasesCytoskeletal ProteinsExtracellular Matrix ProteinsLuciferasesMicroRNAsMIRN709 microRNA, mouse

Identifiers

PMID26743462
PMCPMC4705522
OpenAlexW2415866723

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.