Evidence map›Paper›PMID 26742849›Full record

ArticleThe Journal of biological chemistry2016

Evolutionary Ancestry of Eukaryotic Protein Kinases and Choline Kinases.

Shenshen Lai, Javad Safaei, Steven Pelech

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.3field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 23 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Shenshen LaiFrom the Division of Neurology, Department of Medicine, University of British Columbia, Vancouver, British Columbia V6T 2B5.
Javad Safaeithe Department of Computer Science, University of British Columbia, Vancouver, British Columbia V6T 1Z4, and.
Steven PelechFrom the Division of Neurology, Department of Medicine, University of British Columbia, Vancouver, British Columbia V6T 2B5, the Kinexus Bioinformatics Corporation, Vancouver, British Columbia V6P 6T3, Canada spelech@kinexus.ca.ORCID http://orcid.org/0000-0003-1112-903X
University of British Columbia · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The reversible phosphorylation of proteins catalyzed by protein kinases in eukaryotes supports an important role for eukaryotic protein kinases (ePKs) in the emergence of nucleated cells in the third superkingdom of life. Choline kinases (ChKs) could also be critical in the early evolution of eukaryotes, because of their function in the biosynthesis of phosphatidylcholine, which is unique to eukaryotic membranes. However, the genomic origins of ePKs and ChKs are unclear. The high degeneracy of protein sequences and broad expansion of ePK families have made this fundamental question difficult to answer. In this study, we identified two class-I aminoacyl-tRNA synthetases with high similarities to consensus amino acid sequences of human protein-serine/threonine kinases. Comparisons of primary and tertiary structures supported that ePKs and ChKs evolved from a common ancestor related to glutaminyl aminoacyl-tRNA synthetases, which may have been one of the key factors in the successful of emergence of ancient eukaryotic cells from bacterial colonies.

Indexed as

Consensus SequenceEvolution, MolecularAmino Acid MotifsAmino Acid SequenceAmino Acyl-tRNA SynthetasesAnimalsBacterial ProteinsCholine KinaseHumansMolecular Sequence DataProtein KinasesProtein Structure, TertiarySequence AlignmentAmino Acyl-tRNA SynthetasesBacterial ProteinsCholine KinaseProtein Kinasesaminoacyl tRNA synthetasecholine kinaseglutaminyl aminoacyl tRNA synthetasephosphatidylcholine biosynthesisprotein evolutionprotein kinaseprotein phosphorylationsignal transduction

Identifiers

PMID26742849
PMCPMC4777853
OpenAlexW2231365168

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.