Evidence map›Paper›PMID 26742431›Full record

ArticleCell death and differentiation2016

NDPK-D (NM23-H4)-mediated externalization of cardiolipin enables elimination of depolarized mitochondria by mitophagy.

V E Kagan, J Jiang, Z Huang, Y Y Tyurina, C Desbourdes, C Cottet-Rousselle, H H Dar, M Verma, V A Tyurin, A A Kapralov and 16 more

Open access · bronzeAbstract read
In one paragraph

Article in Cell death and differentiation, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 127 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
127citing papers in PubMed, 1 pooled it
15.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

127 citing papers in PubMed, 1 synthesis or guideline pooled it, 238 citations in OpenAlex.

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67 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

26 authors at 5 institutions in 3 countries.

V E KaganDepartment of Environmental and Occupational Health, Center for Free Radical and Antioxidant Health, University of Pittsburgh, Pittsburgh, PA, USA.
J JiangDepartment of Environmental and Occupational Health, Center for Free Radical and Antioxidant Health, University of Pittsburgh, Pittsburgh, PA, USA.
Z HuangDepartment of Environmental and Occupational Health, Center for Free Radical and Antioxidant Health, University of Pittsburgh, Pittsburgh, PA, USA.
Y Y TyurinaDepartment of Environmental and Occupational Health, Center for Free Radical and Antioxidant Health, University of Pittsburgh, Pittsburgh, PA, USA.
C DesbourdesUniversity Grenoble Alpes-UJF, Laboratory of Fundamental and Applied Bioenergetics (LBFA), and SFR Environmental and Systems Biology (BEeSy), U1055, Grenoble, France.
C Cottet-RousselleUniversity Grenoble Alpes-UJF, Laboratory of Fundamental and Applied Bioenergetics (LBFA), and SFR Environmental and Systems Biology (BEeSy), U1055, Grenoble, France.
H H DarDepartment of Environmental and Occupational Health, Center for Free Radical and Antioxidant Health, University of Pittsburgh, Pittsburgh, PA, USA.
M VermaDepartment of Pathology, University of Pittsburgh, Pittsburgh, PA, USA.
V A TyurinDepartment of Environmental and Occupational Health, Center for Free Radical and Antioxidant Health, University of Pittsburgh, Pittsburgh, PA, USA.
A A KapralovDepartment of Environmental and Occupational Health, Center for Free Radical and Antioxidant Health, University of Pittsburgh, Pittsburgh, PA, USA.
A CheikhiDepartment of Environmental and Occupational Health, Center for Free Radical and Antioxidant Health, University of Pittsburgh, Pittsburgh, PA, USA.
G MaoDepartment of Environmental and Occupational Health, Center for Free Radical and Antioxidant Health, University of Pittsburgh, Pittsburgh, PA, USA.
D StolzDepartment of Cell Biology and Physiology, University of Pittsburgh, Pittsburgh, PA, USA.
C M St CroixDepartment of Cell Biology and Physiology, University of Pittsburgh, Pittsburgh, PA, USA.
S WatkinsDepartment of Cell Biology and Physiology, University of Pittsburgh, Pittsburgh, PA, USA.
Z ShenDepartment of Biological Sciences, Wayne State University, Detroit, MI, USA.
Y LiDepartment of Biological Sciences, Wayne State University, Detroit, MI, USA.
M L GreenbergDepartment of Biological Sciences, Wayne State University, Detroit, MI, USA.
M Tokarska-SchlattnerUniversity Grenoble Alpes-UJF, Laboratory of Fundamental and Applied Bioenergetics (LBFA), and SFR Environmental and Systems Biology (BEeSy), U1055, Grenoble, France.
M BoissanSorbonne Universités, UPMC Univ Paris 06, Saint-Antoine Research Center, INSERM UMR-S 938, Paris, France.
M-L LacombeSorbonne Universités, UPMC Univ Paris 06, Saint-Antoine Research Center, INSERM UMR-S 938, Paris, France.
R M EpandDepartment of Biochemistry and Biomedical Sciences, McMaster University, Hamilton, Ontario, Canada.
C T ChuDepartment of Pathology, University of Pittsburgh, Pittsburgh, PA, USA.
R K MallampalliDepartment of Medicine, Acute Lung Injury Center of Excellence, University of Pittsburgh, Pittsburgh, PA, USA.
H BayırDepartment of Critical Care Medicine, University of Pittsburgh, Pittsburgh, PA, USA.
U SchlattnerUniversity Grenoble Alpes-UJF, Laboratory of Fundamental and Applied Bioenergetics (LBFA), and SFR Environmental and Systems Biology (BEeSy), U1055, Grenoble, France.
University of Pittsburgh · USInserm · FRWayne State University · USCentre de Recherche Saint-Antoine · FRMcMaster University · CA

Funding

Training and EducationU19AI068021 · NIAID · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI GREENBERGER, JOEL S · 2005 to 2019
$44.4M
Regulation of Cardiolin Byosynthesis in Epithelial InjuryP01HL114453 · NHLBI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI MALLAMPALLI, RAMA K · 2014 to 2023
$21.3M
Mapping Lipid Oxidation in Traumatic Brain Injury by Mass Spectrometric ImagingR01NS076511 · NINDS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI Hülya Bayir, Valerian E Kagan · 2012 to 2026
$6.8M
Regulation of Autophagy & Mitochondrial Recycling in Neuronal Cell Death- SupplementR01AG026389 · NIA · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI CHU, CHARLEEN T · 2007 to 2024
$6.0M
F box-Induced Acute Lung Injury and ParkinR01HL096376 · NHLBI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI MALLAMPALLI, RAMA K · 2010 to 2025
$5.1M
Stabilizing mitochondria in sepsisR01HL098174 · NHLBI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI MALLAMPALLI, RAMA K · 2010 to 2021
$3.6M
Oxidative Lipidomics in Pediatric Traumatic Brain InjuryR01NS061817 · NINDS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI BAYIR, HÜLYA · 2008 to 2018
$3.3M
THE ROLE OF CARDIOLIPIN IN THE TCA CYCLE: IMPLICATIONS FOR BARTH SYNDROMER01HL117880 · NHLBI · WAYNE STATE UNIVERSITY · PI GREENBERG, MIRIAM L · 2014 to 2023
$3.0M
Lung Oxidative Stress/Inflammation By Carbon NanotubesR01OH008282 · OH · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI KAGAN, VALERIAN E · 2005 to 2014
$2.8M
Oxygenated Species of Cardiolipins as Biomarkers of Mitochondrial DysfunctionR01ES020693 · NIEHS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI KAGAN, VALERIAN E, TYURINA, YULIA Y · 2011 to 2015
$1.7M
PINK1 Regulation of Neuronal and Mitochondrial HomeostasisR01NS065789 · NINDS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI CHU, CHARLEEN T · 2011 to 2014
$1.3M
PINK1 Regulation of Neuronal and Mitochondrial HomeostasisR56NS065789 · NINDS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI CHU, CHARLEEN T · 2010 to 2016
$813k
BLRD VA I01 BX002200NHLBI NIH HHS P01 HL114453NHLBI NIH HHS R01 HL096376NHLBI NIH HHS R01 HL098174NHLBI NIH HHS R01 HL117880NIAID NIH HHS U19 AI068021NIA NIH HHS R01 AG026389NIEHS NIH HHS R01 ES020693NINDS NIH HHS R01 NS061817NINDS NIH HHS R01 NS065789NINDS NIH HHS R01 NS076511NINDS NIH HHS R56 NS065789NIOSH CDC HHS R01 OH008282
6 · The paper itself

Abstract

Mitophagy is critical for cell homeostasis. Externalization of the inner mitochondrial membrane phospholipid, cardiolipin (CL), to the surface of the outer mitochondrial membrane (OMM) was identified as a mitophageal signal recognized by the microtubule-associated protein 1 light chain 3. However, the CL-translocating machinery remains unknown. Here we demonstrate that a hexameric intermembrane space protein, NDPK-D (or NM23-H4), binds CL and facilitates its redistribution to the OMM. We found that mitophagy induced by a protonophoric uncoupler, carbonyl cyanide m-chlorophenylhydrazone (CCCP), caused externalization of CL to the surface of mitochondria in murine lung epithelial MLE-12 cells and human cervical adenocarcinoma HeLa cells. RNAi knockdown of endogenous NDPK-D decreased CCCP-induced CL externalization and mitochondrial degradation. A R90D NDPK-D mutant that does not bind CL was inactive in promoting mitophagy. Similarly, rotenone and 6-hydroxydopamine triggered mitophagy in SH-SY5Y cells was also suppressed by knocking down of NDPK-D. In situ proximity ligation assay (PLA) showed that mitophagy-inducing CL-transfer activity of NDPK-D is closely associated with the dynamin-like GTPase OPA1, implicating fission-fusion dynamics in mitophagy regulation.

Indexed as

MitophagyAnimalsAutophagyCarbonyl Cyanide m-Chlorophenyl HydrazoneCardiolipinsCell LineGTP PhosphohydrolasesHeLa CellsHumansLysosomesMiceMicrotubule-Associated ProteinsMitochondriaMitochondrial MembranesMutagenesis, Site-DirectedNucleoside Diphosphate Kinase DCarbonyl Cyanide m-Chlorophenyl HydrazoneCardiolipinsGTP PhosphohydrolasesMicrotubule-Associated ProteinsNME4 protein, humanNucleoside Diphosphate Kinase DOPA1 protein, humanOxidopamineRotenone

Identifiers

PMID26742431
PMCPMC4946882
OpenAlexW2240173075

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.