Evidence map›Paper›PMID 26740586›Full record

ArticleOpen biology2016

The DyP-type peroxidase DtpA is a Tat-substrate required for GlxA maturation and morphogenesis in Streptomyces.

Marloes L C Petrus, Erik Vijgenboom, Amanda K Chaplin, Jonathan A R Worrall, Gilles P van Wezel, Dennis Claessen

Open access · goldAbstract read
In one paragraph

Article in Open biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
8.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 69 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Characterization ofApplied and environmental microbiology · 2024
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  5. CslA and GlxA fromApplied and environmental microbiology · 2024
    Article
  6. Article
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  8. Unexpected diversity of dye-decolorizing peroxidases.Biochemistry and biophysics reports · 2023
    Article
  9. Article
  10. Article
  11. Review
  12. Genetic Engineering ofMicroorganisms · 2021
    Article
  13. Aspartate or arginine? Validated redox state X-ray structures elucidate mechanistic subtleties of FeJournal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2021
    Review
  14. Characterization of Class V DyP-Type Peroxidase SaDyP1 fromInternational journal of molecular sciences · 2021
    Article
  15. DyP-Type Peroxidases: Recent Advances and Perspectives.International journal of molecular sciences · 2021
    Review
  16. Iron Oxidation inAngewandte Chemie (Weinheim an der Bergstrasse, Germany) · 2021
    Article
  17. Article
  18. Article
  19. Article
  20. Accelerated Growth ofJournal of microbiology and biotechnology · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Marloes L C PetrusMolecular Biotechnology, Institute of Biology, Leiden University, Sylviusweg 72, 2333 BE Leiden, The Netherlands.
Erik VijgenboomMolecular Biotechnology, Institute of Biology, Leiden University, Sylviusweg 72, 2333 BE Leiden, The Netherlands.ORCID http://orcid.org/0000-0002-5059-069X
Amanda K ChaplinSchool of Biological Science, University of Essex, Wivenhoe Park, Colchester CO4 3SQ, UK.
Jonathan A R WorrallSchool of Biological Science, University of Essex, Wivenhoe Park, Colchester CO4 3SQ, UK.
Gilles P van WezelMolecular Biotechnology, Institute of Biology, Leiden University, Sylviusweg 72, 2333 BE Leiden, The Netherlands.
Dennis ClaessenMolecular Biotechnology, Institute of Biology, Leiden University, Sylviusweg 72, 2333 BE Leiden, The Netherlands d.claessen@biology.leidenuniv.nl.ORCID http://orcid.org/0000-0002-0789-2633
Leiden University · NLUniversity of Essex · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The filamentous bacterium Streptomyces lividans depends on the radical copper oxidase GlxA for the formation of reproductive aerial structures and, in liquid environments, for the formation of pellets. Incorporation of copper into the active site is essential for the formation of a cross-linked tyrosyl-cysteine cofactor, which is needed for enzymatic activity. In this study, we show a crucial link between GlxA maturation and a group of copper-related proteins including the chaperone Sco and a novel DyP-type peroxidase hereinafter called DtpA. Under copper-limiting conditions, the sco and dtpA deletion mutants are blocked in aerial growth and pellet formation, similarly to a glxA mutant. Western blot analysis showed that GlxA maturation is perturbed in the sco and dtpA mutants, but both maturation and morphology can by rescued by increasing the bioavailability of copper. DtpA acts as a peroxidase in the presence of GlxA and is a substrate for the twin-arginine translocation (Tat) translocation pathway. In agreement, the maturation status of GlxA is also perturbed in tat mutants, which can be compensated for by the addition of copper, thereby partially restoring their morphological defects. Our data support a model wherein a copper-trafficking pathway and Tat-dependent secretion of DtpA link to the GlxA-dependent morphogenesis pathway.

Indexed as

Amino Acid SequenceBacterial ProteinsCopperEscherichia coliGenes, BacterialImmunoblottingModels, BiologicalMolecular Sequence DataMutationPeroxidasePhenotypeStreptomyces lividansSubstrate SpecificityBacterial ProteinsCopperPeroxidasecuproenzymeDyP-type peroxidaseGlxA maturationglycanmorphogenesistwin-arginine translocation

Identifiers

PMID26740586
PMCPMC4736821
OpenAlexW2280201938

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.