Evidence map›Paper›PMID 26739615›Full record

ArticleGenome medicine2016

POGZ truncating alleles cause syndromic intellectual disability.

Janson White, Christine R Beck, Tamar Harel, Jennifer E Posey, Shalini N Jhangiani, Sha Tang, Kelly D Farwell, Zöe Powis, Nancy J Mendelsohn, Janice A Baker and 21 more

Open access · goldAbstract read
In one paragraph

Article in Genome medicine, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 71 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
71citing papers in PubMed, 1 pooled it
8.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

71 citing papers in PubMed, 1 synthesis or guideline pooled it, 106 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Article
  4. Article
  5. Translational pediatrics · 2026
    Article
  6. Spectrum of Congenital Heart Diseases in Iraqi Patients.The Eurasian journal of medicine · 2026
    Article
  7. Article
  8. Article
  9. CRISPR-engineered deletion ofbioRxiv : the preprint server for biology · 2025
    Article
  10. Strabismus in Genetic Syndromes: A Review.Clinical & experimental ophthalmology · 2025
    Review
  11. Article
  12. Article
  13. The chromatin remodeler ADNP regulates neurodevelopmental disorder risk genes and neocortical neurogenesis.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review

11 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

31 authors at 9 institutions in 1 country.

Janson WhiteDepartment of Molecular and Human Genetics, Baylor College of Medicine and Texas Children's Hospital, Houston, TX, 77030, USA.
Christine R BeckDepartment of Molecular and Human Genetics, Baylor College of Medicine and Texas Children's Hospital, Houston, TX, 77030, USA.
Tamar HarelDepartment of Molecular and Human Genetics, Baylor College of Medicine and Texas Children's Hospital, Houston, TX, 77030, USA.
Jennifer E PoseyDepartment of Molecular and Human Genetics, Baylor College of Medicine and Texas Children's Hospital, Houston, TX, 77030, USA.
Shalini N JhangianiHuman Genome Sequencing Center, Baylor College of Medicine, Houston, TX, 77030, USA.
Sha TangAmbry Genetics, Aliso Viejo, CA, 92656, USA.
Kelly D FarwellAmbry Genetics, Aliso Viejo, CA, 92656, USA.
Zöe PowisAmbry Genetics, Aliso Viejo, CA, 92656, USA.
Nancy J MendelsohnChildren's Hospitals and Clinics of Minnesota, Minneapolis, MN, 55102, USA.
Janice A BakerChildren's Hospitals and Clinics of Minnesota, Minneapolis, MN, 55102, USA.
Lynda PollackArnold Palmer Medical Center, Division of Genetics, Orlando, FL, 32806, USA.
Kati J MasonArnold Palmer Medical Center, Division of Genetics, Orlando, FL, 32806, USA.
Klaas J WierengaUniversity of Oklahoma Health Sciences Center, Oklahoma City, OK, 73104, USA.
Daniel K ArringtonUniversity of Oklahoma Health Sciences Center, Oklahoma City, OK, 73104, USA.
Melissa HallUniversity of Oklahoma Health Sciences Center, Oklahoma City, OK, 73104, USA.
Apostolos PsychogiosDepartment of Pediatrics, Vanderbilt University Medical Center, Nashville, TN, 37212, USA.
Laura FairbrotherDepartment of Pediatrics, Vanderbilt University Medical Center, Nashville, TN, 37212, USA.
Magdalena WalkiewiczDepartment of Molecular and Human Genetics, Baylor College of Medicine and Texas Children's Hospital, Houston, TX, 77030, USA.
Richard E PersonDepartment of Molecular and Human Genetics, Baylor College of Medicine and Texas Children's Hospital, Houston, TX, 77030, USA.
Zhiyv NiuDepartment of Molecular and Human Genetics, Baylor College of Medicine and Texas Children's Hospital, Houston, TX, 77030, USA.
Jing ZhangDepartment of Molecular and Human Genetics, Baylor College of Medicine and Texas Children's Hospital, Houston, TX, 77030, USA.
Jill A RosenfeldDepartment of Molecular and Human Genetics, Baylor College of Medicine and Texas Children's Hospital, Houston, TX, 77030, USA.
Donna M MuznyHuman Genome Sequencing Center, Baylor College of Medicine, Houston, TX, 77030, USA.
Christine EngDepartment of Molecular and Human Genetics, Baylor College of Medicine and Texas Children's Hospital, Houston, TX, 77030, USA.
Arthur L BeaudetDepartment of Molecular and Human Genetics, Baylor College of Medicine and Texas Children's Hospital, Houston, TX, 77030, USA.
James R LupskiDepartment of Molecular and Human Genetics, Baylor College of Medicine and Texas Children's Hospital, Houston, TX, 77030, USA.
Eric BoerwinkleHuman Genome Sequencing Center, Baylor College of Medicine, Houston, TX, 77030, USA.
Richard A GibbsDepartment of Molecular and Human Genetics, Baylor College of Medicine and Texas Children's Hospital, Houston, TX, 77030, USA.
Yaping YangDepartment of Molecular and Human Genetics, Baylor College of Medicine and Texas Children's Hospital, Houston, TX, 77030, USA.
Fan XiaDepartment of Molecular and Human Genetics, Baylor College of Medicine and Texas Children's Hospital, Houston, TX, 77030, USA.
V Reid SuttonDepartment of Molecular and Human Genetics, Baylor College of Medicine and Texas Children's Hospital, Houston, TX, 77030, USA. vrsutton@texaschildrens.org.
Texas Children's Hospital · USBaylor College of Medicine · USBaylor Genetics · USAmbry Genetics (United States) · USUniversity of Oklahoma Health Sciences Center · USArnold Palmer Hospital for Children · USChildren's Minnesota · USVanderbilt University Medical Center · USThe University of Texas Health Science Center at Houston · US

Funding

UNDERSTANDING FXTAS AMONG MALES WITH THE FMR1 PREMUTATIONP30HD024064 · NICHD · BAYLOR COLLEGE OF MEDICINE · PI ROSENMUND, CHRISTIAN · 1988 to 2013
$29.4M
Baylor-Johns Hopkins Center for Mendelian GeneticsU54HG006542 · NHGRI · JOHNS HOPKINS UNIVERSITY · PI VALLE, DAVID · 2012 to 2015
$15.6M
Baylor-Johns Hopkins Center for Mendelian GeneticsUM1HG006542 · NHGRI · JOHNS HOPKINS UNIVERSITY · PI VALLE, DAVID · 2016 to 2020
$14.5M
MEDICAL GENETICS RESEARCH FELLOWSHIP PROGRAMT32GM007526 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI Brendan Lee · 1985 to 2026
$11.4M
Steps towards a paternal gene activation therapy for Angelman syndromeU54HD083092 · NICHD · BAYLOR COLLEGE OF MEDICINE · PI ARENKIEL, BENJAMIN R, NELSON, DAVID LOREN · 2014 to 2019
$7.8M
PROGRAM IN HUMAN MOLECULAR GENETICST32GM008307 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI SHAULSKY, GAD · 1990 to 2020
$6.6M
Nonrecurrent rearrangements, genome architecture and neurodegenerative disease.R01NS058529 · NINDS · BAYLOR COLLEGE OF MEDICINE · PI LUPSKI, JAMES R. · 2009 to 2017
$5.0M
NHGRI NIH HHS HG006542NHGRI NIH HHS U54 HG006542NHGRI NIH HHS UM1 HG006542NHLBI NIH HHS HHSN268201100005CNHLBI NIH HHS HHSN268201100005GNHLBI NIH HHS HHSN268201100005INHLBI NIH HHS HHSN268201100006CNHLBI NIH HHS HHSN268201100007CNHLBI NIH HHS HHSN268201100007INHLBI NIH HHS HHSN268201100008CNHLBI NIH HHS HHSN268201100008INHLBI NIH HHS HHSN268201100009CNHLBI NIH HHS HHSN268201100009INHLBI NIH HHS HHSN268201100010CNHLBI NIH HHS HHSN268201100011CNHLBI NIH HHS HHSN268201100011INHLBI NIH HHS HHSN268201100012CNICHD NIH HHS HD024064NICHD NIH HHS P30 HD024064NICHD NIH HHS U54 HD083092NIGMS NIH HHS T32 GM007526NIGMS NIH HHS T32 GM008307NIGMS NIH HHS T32GM008307NIGMS NIH HHS T32 GM07526NINDS NIH HHS NS058529NINDS NIH HHS R01 NS058529
6 · The paper itself

Abstract

backgroundLarge-scale cohort-based whole exome sequencing of individuals with neurodevelopmental disorders (NDDs) has identified numerous novel candidate disease genes; however, detailed phenotypic information is often lacking in such studies. De novo mutations in pogo transposable element with zinc finger domain (POGZ) have been identified in six independent and diverse cohorts of individuals with NDDs ranging from autism spectrum disorder to developmental delay.

methodsWhole exome sequencing was performed on five unrelated individuals. Sanger sequencing was used to validate variants and segregate mutations with the phenotype in available family members.

resultsWe identified heterozygous truncating mutations in POGZ in five unrelated individuals, which were confirmed to be de novo or not present in available parental samples. Careful review of the phenotypes revealed shared features that included developmental delay, intellectual disability, hypotonia, behavioral abnormalities, and similar facial characteristics. Variable features included short stature, microcephaly, strabismus and hearing loss.

conclusionsWhile POGZ has been associated with neurodevelopmental disorders in large cohort studies, our data suggest that loss of function variants in POGZ lead to an identifiable syndrome of NDD with specific phenotypic traits. This study exemplifies the era of human reverse clinical genomics ushered in by large disease-directed cohort studies; first defining a new syndrome molecularly and, only subsequently, phenotypically.

Indexed as

MutationAdolescentAdultAllelesCell Cycle ProteinsChild, PreschoolDNA-Binding ProteinsExomeFemaleHeterozygoteHumansInfantIntellectual DisabilityMaleSequence Analysis, DNATransposasesCell Cycle ProteinsDNA-Binding ProteinsPOGZ protein, humanTransposases

Identifiers

PMID26739615
PMCPMC4702300
OpenAlexW2231796009

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.