Evidence map›Paper›PMID 26739233›Full record

ArticlePlant physiology2016

Cis-Regulatory Elements Determine Germline Specificity and Expression Level of an Isopentenyltransferase Gene in Sperm Cells of Arabidopsis.

Jinghua Zhang, Tong Yuan, Xiaomeng Duan, Xiaoping Wei, Tao Shi, Jia Li, Scott D Russell, Xiaoping Gou

Abstract read
In one paragraph

Article in Plant physiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Jinghua ZhangMinistry of Education Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou 730000, China (J.Z., X.D., T.S., J.L., S.D.R., X.G.); Department of Microbiology and Plant Biology, University of Oklahoma, Norman, Oklahoma 73019 (T.Y., X.W., S.D.R.).ORCID http://orcid.org/0000-0002-0542-0704
Tong YuanMinistry of Education Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou 730000, China (J.Z., X.D., T.S., J.L., S.D.R., X.G.); Department of Microbiology and Plant Biology, University of Oklahoma, Norman, Oklahoma 73019 (T.Y., X.W., S.D.R.).
Xiaomeng DuanMinistry of Education Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou 730000, China (J.Z., X.D., T.S., J.L., S.D.R., X.G.); Department of Microbiology and Plant Biology, University of Oklahoma, Norman, Oklahoma 73019 (T.Y., X.W., S.D.R.).
Xiaoping WeiMinistry of Education Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou 730000, China (J.Z., X.D., T.S., J.L., S.D.R., X.G.); Department of Microbiology and Plant Biology, University of Oklahoma, Norman, Oklahoma 73019 (T.Y., X.W., S.D.R.).
Tao ShiMinistry of Education Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou 730000, China (J.Z., X.D., T.S., J.L., S.D.R., X.G.); Department of Microbiology and Plant Biology, University of Oklahoma, Norman, Oklahoma 73019 (T.Y., X.W., S.D.R.).ORCID http://orcid.org/0000-0002-6340-266X
Jia LiMinistry of Education Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou 730000, China (J.Z., X.D., T.S., J.L., S.D.R., X.G.); Department of Microbiology and Plant Biology, University of Oklahoma, Norman, Oklahoma 73019 (T.Y., X.W., S.D.R.).
Scott D RussellMinistry of Education Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou 730000, China (J.Z., X.D., T.S., J.L., S.D.R., X.G.); Department of Microbiology and Plant Biology, University of Oklahoma, Norman, Oklahoma 73019 (T.Y., X.W., S.D.R.) gouxp@lzu.edu.cn srussell@ou.edu.ORCID http://orcid.org/0000-0001-8302-4160
Xiaoping GouMinistry of Education Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou 730000, China (J.Z., X.D., T.S., J.L., S.D.R., X.G.); Department of Microbiology and Plant Biology, University of Oklahoma, Norman, Oklahoma 73019 (T.Y., X.W., S.D.R.) gouxp@lzu.edu.cn srussell@ou.edu.ORCID http://orcid.org/0000-0002-8391-0258

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Flowering plant sperm cells transcribe a divergent and complex complement of genes. To examine promoter function, we chose an isopentenyltransferase gene known as PzIPT1. This gene is highly selectively transcribed in one sperm cell morphotype of Plumbago zeylanica, which preferentially fuses with the central cell during fertilization and is thus a founding cell of the primary endosperm. In transgenic Arabidopsis (Arabidopsis thaliana), PzIPT1 promoter displays activity in both sperm cells and upon progressive promoter truncation from the 5'-end results in a progressive decrease in reporter production, consistent with occurrence of multiple enhancer sites. Cytokinin-dependent protein binding motifs are identified in the promoter sequence, which respond with stimulation by cytokinin. Expression of PzIPT1 promoter in sperm cells confers specificity independently of previously reported Germline Restrictive Silencer Factor binding sequence. Instead, a cis-acting regulatory region consisting of two duplicated 6-bp Male Gamete Selective Activation (MGSA) motifs occurs near the site of transcription initiation. Disruption of this sequence-specific site inactivates expression of a GFP reporter gene in sperm cells. Multiple copies of the MGSA motif fused with the minimal CaMV35S promoter elements confer reporter gene expression in sperm cells. Similar duplicated MGSA motifs are also identified from promoter sequences of sperm cell-expressed genes in Arabidopsis, suggesting selective activation is possibly a common mechanism for regulation of gene expression in sperm cells of flowering plants.

Indexed as

Alkyl and Aryl TransferasesArabidopsisCytokininsGene Expression Regulation, PlantGreen Fluorescent ProteinsMicroscopy, ConfocalMutationNucleotide MotifsPlant Growth RegulatorsPlant ProteinsPlants, Genetically ModifiedPlumbaginaceaePollenPromoter Regions, GeneticRegulatory Sequences, Nucleic AcidReverse Transcriptase Polymerase Chain Reactionadenylate isopentenyltransferaseAlkyl and Aryl TransferasesCytokininsGreen Fluorescent ProteinsPlant Growth RegulatorsPlant Proteins

Identifiers

PMID26739233
PMCPMC4775122

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.