Evidence map›Paper›PMID 26739158›Full record

ArticleJournal of clinical microbiology2016

Evaluation of the FilmArray Blood Culture Identification Panel: Results of a Multicenter Controlled Trial.

Hossein Salimnia, Marilynn R Fairfax, Paul R Lephart, Paul Schreckenberger, Sharon M DesJarlais, J Kristie Johnson, Gwen Robinson, Karen C Carroll, Amy Greer, Margie Morgan and 9 more

Registry-linked trialAbstract read
In one paragraph

Article in Journal of clinical microbiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT05287438 (Next Generation Sequencing Versus Traditional Cultures for Clinically Infected Penile Implants), which is not on this map. Cited by 115 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
115citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT05287438 naunknown statusnot on this mapstarted 2021, after this paper: background citation

Next Generation Sequencing Versus Traditional Cultures for Clinically Infected Penile Implants: Impact of Culture Identification on Outcomes

TypeinterventionalSponsorMicroGenDXRan2021 to 2024Enrolled40ConditionsPenile Implantation, InfectionsArmsNext-Generation DNA Sequencing, Standard Culture
3 · Its place in the literature

Who cites it

115 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  5. Observational
  6. Review
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  13. Amplification-free, OR-gated CRISPR-Cascade reaction for pathogen detection in blood samples.Proceedings of the National Academy of Sciences of the United States of America · 2025
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55 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Hossein SalimniaDepartment of Pathology, Wayne State University School of Medicine, Detroit, Michigan, USA DMC University Laboratories, Detroit, Michigan, USA.
Marilynn R FairfaxDepartment of Pathology, Wayne State University School of Medicine, Detroit, Michigan, USA DMC University Laboratories, Detroit, Michigan, USA mfairfax@dmc.org.
Paul R LephartDMC University Laboratories, Detroit, Michigan, USA.
Paul SchreckenbergerLoyola University Medical Center, Chicago, Illinois, USA.
Sharon M DesJarlaisLoyola University Medical Center, Chicago, Illinois, USA.
J Kristie JohnsonDepartment of Pathology, University of Maryland, Baltimore, Maryland, USA.
Gwen RobinsonDepartment of Pathology, University of Maryland, Baltimore, Maryland, USA.
Karen C CarrollDivision of Medical Microbiology, Department of Pathology, The Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.
Amy GreerDivision of Medical Microbiology, Department of Pathology, The Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.
Margie MorganCedars-Sinai Medical Center, Los Angeles, California, USA.
Raymond ChanCedars-Sinai Medical Center, Los Angeles, California, USA.
Michael LoeffelholzDepartment of Pathology, University of Texas Medical Branch, Galveston, Texas, USA.
Frances Valencia-SheltonDepartment of Pathology, University of Texas Medical Branch, Galveston, Texas, USA.
Stephen JenkinsNew York-Presbyterian Hospital, Weill-Cornell Medical Center, New York, New York, USA.
Audrey N SchuetzNew York-Presbyterian Hospital, Weill-Cornell Medical Center, New York, New York, USA.
Judy A DalyDepartment of Pathology, University of Utah, and Primary Children's Medical Center, Salt Lake City, Utah, USA.
Trenda BarneyDepartment of Pathology, University of Utah, and Primary Children's Medical Center, Salt Lake City, Utah, USA.
Andrew HemmertBioFire Diagnostics LLC, Salt Lake City, Utah, USA.
Kristen J KanackBioFire Diagnostics LLC, Salt Lake City, Utah, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sepsis is a major cause of morbidity, mortality, and increased medical expense. Rapid diagnosis improves outcomes and reduces costs. The FilmArray blood culture identification panel (BioFire Diagnostics LLC, Salt Lake City, UT), a highly multiplexed PCR assay, can identify 24 etiologic agents of sepsis (8 Gram-positive, 11 Gram-negative, and 5 yeast species) and three antimicrobial resistance genes (mecA, vanA/B, and blaKPC) from positive blood culture bottles. It provides results in about 1 h with 2 min for assay setup. We present the results of an eight-center trial comparing the sensitivity and specificity of the panel with those of the laboratories' standard phenotypic identification techniques, as well as with molecular methods used to distinguish Acinetobacter baumannii from other members of the A. calcoaceticus-A. baumannii complex and to detect antimicrobial resistance genes. Testing included 2,207 positive aerobic blood culture samples, 1,568 clinical and 639 seeded. Samples were tested fresh or were frozen for later testing within 8 h after the bottles were flagged as positive by an automated blood culture system. At least one organism was detected by the panel in 1,382 (88.1%) of the positive clinical specimens. The others contained primarily off-panel organisms. The panel reported multiple organisms in 81 (5.86%) positive clinical specimens. The unresolved blood culture identification sensitivity for all target detections exceeded 96%, except for Klebsiella oxytoca (92.2%), which achieved 98.3% sensitivity after resolution of an unavoidable phenotypic error. The sensitivity and specificity for vanA/B and blaKPC were 100%; those for mecA were 98.4 and 98.3%, respectively.

Indexed as

Multiplex Polymerase Chain ReactionBacteriaDrug Resistance, BacterialDrug Resistance, FungalGenes, BacterialGenes, FungalHumansReproducibility of ResultsSensitivity and SpecificitySepsisYeasts

Identifiers

PMID26739158
PMCPMC4767991

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.